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Difference between revisions of "TSS:Hg 103286.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000625103.1:3 ENST00000476211.5:4 ENST00000398207.8:8 BC172448:9 ENST00000459850.5:-16 ENST00000487109.5:-16 BC144588:-16 BC144589:-16 ENST00000614293.4:-23 NM_212533:-23 ENST00000425423.1:74
+
|all_trans=HGNC:32
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 22: Line 22:
 
|nearest_refseq=NM_001606
 
|nearest_refseq=NM_001606
 
|nearest_unigene=Hs.421202
 
|nearest_unigene=Hs.421202
|num_trans=11
+
|num_trans=20
 
|species=human
 
|species=human
 
|start=137028880
 
|start=137028880

Latest revision as of 18:45, 19 July 2021

Basic information about the TSS


TSS ID:hg_103286.1
Species:human
Chr:chr9
TSS Classification:yes
Start:137028880
End:137028899
Strand:-
TSS Score:1
Start of the center position in the TSS region:137028889
End of the center position in the TSS region:137028890



Gene and protein annotation


Transcript_name:ENST00000625103.1
Distance:3
GeneID:20
HGNC/MGI_ID:HGNC:32
UniProt_ID:A0A096LP90
Gene_name:ATP binding cassette subfamily A member 2
Gene_symbol:ABCA2
Gene_synonyms:
Gene_source:HGNC:32



Transcript annotation


Transcript_name:ENST00000625103.1
Distance:3
Num_trans:20
All_trans:HGNC:32



TATA-Box annotation


Distance to TSS:32
Nearest PromoterID:NM_212533
Entrez ID:20
Nearest Unigene:Hs.421202
Nearest Refseq:NM_001606
Nearest Ensembl:ENSG00000107331
Gene Name:ATP binding cassette subfamily A member 2
Gene Alias:ABC2
Gene Description:ATP binding cassette subfamily A member 2
Gene Type:protein-coding
CpG%:0.09
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):