Personal tools

Difference between revisions of "TSS:Hg 103300.1"

From referenceTSS

Jump to: navigation, search
 
Line 4: Line 4:
 
|CAB1=
 
|CAB1=
 
|NPDC-1=
 
|NPDC-1=
|all_trans=AF285836:461 ENST00000485589.1:485 ENST00000371601.5:487 NM_015392:487 AK074793:487
+
|all_trans=HGNC:7899
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 26: Line 26:
 
|nearest_refseq=NM_015392
 
|nearest_refseq=NM_015392
 
|nearest_unigene=Hs.719906
 
|nearest_unigene=Hs.719906
|num_trans=5
+
|num_trans=56654
 
|species=human
 
|species=human
 
|start=137046663
 
|start=137046663

Latest revision as of 18:45, 19 July 2021

Basic information about the TSS


TSS ID:hg_103300.1
Species:human
Chr:chr9
TSS Classification:yes
Start:137046663
End:137046700
Strand:-
TSS Score:1
Start of the center position in the TSS region:137046681
End of the center position in the TSS region:137046682



Gene and protein annotation


Transcript_name:AF285836
Distance:461
GeneID:56654
HGNC/MGI_ID:HGNC:7899
UniProt_ID:
Gene_name:neural proliferation, differentiation and control 1
Gene_symbol:NPDC1
Gene_synonyms:CAB- CAB1 DKFZp586J0523
Gene_source:HGNC:7899



Transcript annotation


Transcript_name:AF285836
Distance:461
Num_trans:56654
All_trans:HGNC:7899



TATA-Box annotation


Distance to TSS:-505
Nearest PromoterID:NM_015392
Entrez ID:56654
Nearest Unigene:Hs.719906
Nearest Refseq:NM_015392
Nearest Ensembl:ENSG00000107281
Gene Name:neural proliferation, differentiation and control 1
Gene Alias:CAB|CAB-|CAB-1|CAB1|NPDC-1
Gene Description:neural proliferation, differentiation and control 1
Gene Type:protein-coding
CpG%:0.06
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):