Difference between revisions of "TSS:Hg 103300.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=-458 |entrez_id=56654 |gc_percent=0.671642 |gene_alias=CAB|CAB-|CAB-1|CAB1|NPDC-1 |gene_description="neural proliferation, diffe...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CAB-= | ||
| + | |CAB-1= | ||
| + | |CAB1= | ||
| + | |NPDC-1= | ||
| + | |all_trans=HGNC:7899 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance_to_tss=- | + | |distance=461 |
| + | |distance_to_tss=-505 | ||
| + | |end=137046700 | ||
| + | |end_of_center_position=137046682 | ||
|entrez_id=56654 | |entrez_id=56654 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=CAB | + | |gene_alias=CAB{{!}}CAB-{{!}}CAB-1{{!}}CAB1{{!}}NPDC-1 |
| − | |gene_description= | + | |gene_description=neural proliferation, differentiation and control 1 |
| − | |gene_name=NPDC1 | + | |gene_id=56654 |
| + | |gene_name=neural proliferation, differentiation and control 1 | ||
| + | |gene_source=HGNC:7899 | ||
| + | |gene_symbol=NPDC1 | ||
| + | |gene_synonyms=CAB- CAB1 DKFZp586J0523 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7899 | ||
|nearest_ensembl=ENSG00000107281 | |nearest_ensembl=ENSG00000107281 | ||
|nearest_promoter_id=NM_015392 | |nearest_promoter_id=NM_015392 | ||
|nearest_refseq=NM_015392 | |nearest_refseq=NM_015392 | ||
|nearest_unigene=Hs.719906 | |nearest_unigene=Hs.719906 | ||
| + | |num_trans=56654 | ||
| + | |species=human | ||
| + | |start=137046663 | ||
| + | |start_of_center_position=137046681 | ||
| + | |strand=- | ||
| + | |transcript_name=AF285836 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103300.1 | |tss_id=hg_103300.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:45, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 137046681 |
|---|---|
| End of the center position in the TSS region: | 137046682 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF285836 |
|---|---|
| Distance: | 461 |
| Num_trans: | 56654 |
| All_trans: | HGNC:7899 |
TATA-Box annotation
| Distance to TSS: | -505 |
|---|---|
| Nearest PromoterID: | NM_015392 |
| Entrez ID: | 56654 |
| Nearest Unigene: | Hs.719906 |
| Nearest Refseq: | NM_015392 |
| Nearest Ensembl: | ENSG00000107281 |
| Gene Name: | neural proliferation, differentiation and control 1 |
| Gene Alias: | CAB|CAB-|CAB-1|CAB1|NPDC-1 |
| Gene Description: | neural proliferation, differentiation and control 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
