Difference between revisions of "TSS:Hg 103305.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:28055 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_178448 | |nearest_refseq=NM_178448 | ||
|nearest_unigene=Hs.19322 | |nearest_unigene=Hs.19322 | ||
| − | |num_trans= | + | |num_trans=89958 |
|p42.3= | |p42.3= | ||
|species=human | |species=human | ||
| Line 28: | Line 28: | ||
|start_of_center_position=137070562 | |start_of_center_position=137070562 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000409687.5 | + | |transcript_name=ENST00000409687.5 BC048267 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103305.1 | |tss_id=hg_103305.1 | ||
Latest revision as of 18:46, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137070562 |
|---|---|
| End of the center position in the TSS region: | 137070563 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000409687.5 BC048267 |
|---|---|
| Distance: | 0 |
| Num_trans: | 89958 |
| All_trans: | HGNC:28055 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_178448 |
| Entrez ID: | 89958 |
| Nearest Unigene: | Hs.19322 |
| Nearest Refseq: | NM_178448 |
| Nearest Ensembl: | ENSG00000186193 |
| Gene Name: | suppressor APC domain containing 2 |
| Gene Alias: | C9orf140|p42.3 |
| Gene Description: | suppressor APC domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
