Difference between revisions of "TSS:Hg 10338.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 7: | Line 7: | ||
|CDP= | |CDP= | ||
|PND= | |PND= | ||
| − | |all_trans= | + | |all_trans=HGNC:7939 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 13: | Line 13: | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
|end=11847790 | |end=11847790 | ||
| + | |end_of_center_position=11847782 | ||
|entrez_id=4878 | |entrez_id=4878 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=ANF | + | |gene_alias=ANF{{!}}ANP{{!}}ATFB6{{!}}ATRST2{{!}}CDD{{!}}CDD-ANF{{!}}CDP{{!}}PND |
|gene_description=natriuretic peptide A | |gene_description=natriuretic peptide A | ||
|gene_id=4878 | |gene_id=4878 | ||
| Line 28: | Line 29: | ||
|nearest_refseq=NM_006172 | |nearest_refseq=NM_006172 | ||
|nearest_unigene=Hs.75640 | |nearest_unigene=Hs.75640 | ||
| − | |num_trans= | + | |num_trans=4878 |
|species=human | |species=human | ||
|start=11847772 | |start=11847772 | ||
| + | |start_of_center_position=11847781 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-34(GGCTATAAAAAG,-,0.00) |
| − | |transcript_name=ENST00000376480.7 ENST00000610706 | + | |transcript_name=ENST00000376480.7 ENST00000610706.1 BC005893 M30262 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_10338.1 | |tss_id=hg_10338.1 | ||
Latest revision as of 18:47, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11847781 |
|---|---|
| End of the center position in the TSS region: | 11847782 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376480.7 ENST00000610706.1 BC005893 M30262 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4878 |
| All_trans: | HGNC:7939 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_006172 |
| Entrez ID: | 4878 |
| Nearest Unigene: | Hs.75640 |
| Nearest Refseq: | NM_006172 |
| Nearest Ensembl: | ENSG00000175206 |
| Gene Name: | natriuretic peptide A |
| Gene Alias: | ANF|ANP|ATFB6|ATRST2|CDD|CDD-ANF|CDP|PND |
| Gene Description: | natriuretic peptide A |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(GGCTATAAAAAG,-,0.00) |
