Difference between revisions of "TSS:Hg 103384.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=136 |entrez_id=375775 |gc_percent=0.567164 |gene_alias=C9orf111|NTE-R1|NTEL1 |gene_description=patatin like phospholipase domain...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |NTE-R1= | ||
| + | |NTEL1= | ||
| + | |all_trans=HGNC:24768 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss= | + | |distance=14 |
| + | |distance_to_tss=-31 | ||
| + | |end=137550451 | ||
| + | |end_of_center_position=137550434 | ||
|entrez_id=375775 | |entrez_id=375775 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=C9orf111 | + | |gene_alias=C9orf111{{!}}NTE-R1{{!}}NTEL1 |
|gene_description=patatin like phospholipase domain containing 7 | |gene_description=patatin like phospholipase domain containing 7 | ||
| − | |gene_name=PNPLA7 | + | |gene_id=375775 |
| + | |gene_name=patatin like phospholipase domain containing 7 | ||
| + | |gene_source=HGNC:24768 | ||
| + | |gene_symbol=PNPLA7 | ||
| + | |gene_synonyms=FLJ31318 FLJ43070 FLJ44279 NTE-R1 NTEL1 RP11-48C7.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24768 | ||
|nearest_ensembl=ENSG00000130653 | |nearest_ensembl=ENSG00000130653 | ||
|nearest_promoter_id=NM_001098537 | |nearest_promoter_id=NM_001098537 | ||
|nearest_refseq=NM_152286 | |nearest_refseq=NM_152286 | ||
|nearest_unigene=Hs.294147 | |nearest_unigene=Hs.294147 | ||
| + | |num_trans=375775 | ||
| + | |species=human | ||
| + | |start=137550415 | ||
| + | |start_of_center_position=137550433 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000406427.6 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103384.1 | |tss_id=hg_103384.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q6ZV29 | ||
}} | }} | ||
Latest revision as of 18:47, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137550433 |
|---|---|
| End of the center position in the TSS region: | 137550434 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000406427.6 |
|---|---|
| Distance: | 14 |
| Num_trans: | 375775 |
| All_trans: | HGNC:24768 |
TATA-Box annotation
| Distance to TSS: | -31 |
|---|---|
| Nearest PromoterID: | NM_001098537 |
| Entrez ID: | 375775 |
| Nearest Unigene: | Hs.294147 |
| Nearest Refseq: | NM_152286 |
| Nearest Ensembl: | ENSG00000130653 |
| Gene Name: | patatin like phospholipase domain containing 7 |
| Gene Alias: | C9orf111|NTE-R1|NTEL1 |
| Gene Description: | patatin like phospholipase domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
