Difference between revisions of "TSS:Hg 103386.1"
From referenceTSS
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|RRT2= | |RRT2= | ||
|WDR85= | |WDR85= | ||
| − | |all_trans= | + | |all_trans=HGNC:25199 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=30 |
|end=137578933 | |end=137578933 | ||
| + | |end_of_center_position=137578896 | ||
|entrez_id=92715 | |entrez_id=92715 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=C9orf112 | + | |gene_alias=C9orf112{{!}}RRT2{{!}}WDR85 |
|gene_description=diphthamide biosynthesis 7 | |gene_description=diphthamide biosynthesis 7 | ||
|gene_id=92715 | |gene_id=92715 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:25199 | |hgnc_mgi_id=HGNC:25199 | ||
|nearest_ensembl=ENSG00000148399 | |nearest_ensembl=ENSG00000148399 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001346387 |
|nearest_refseq=NM_138778 | |nearest_refseq=NM_138778 | ||
|nearest_unigene=Hs.292570 | |nearest_unigene=Hs.292570 | ||
| − | |num_trans= | + | |num_trans=92715 |
|species=human | |species=human | ||
|start=137578857 | |start=137578857 | ||
| + | |start_of_center_position=137578895 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000479650.5 ENST00000475100.5 ENST00000472113.5 ENST00000467768.5 ENST00000476303.1 ENST00000491359 | + | |transcript_name=ENST00000277540.7 ENST00000479650.5 ENST00000475100.5 ENST00000472113.5 ENST00000467768.5 ENST00000476303.1 ENST00000491359.1 BC003123 BC017335 BC016349 AK308998 AK307180 AK310987 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103386.1 | |tss_id=hg_103386.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9BTV6 |
}} | }} | ||
Latest revision as of 18:47, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137578895 |
|---|---|
| End of the center position in the TSS region: | 137578896 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000277540.7 ENST00000479650.5 ENST00000475100.5 ENST00000472113.5 ENST00000467768.5 ENST00000476303.1 ENST00000491359.1 BC003123 BC017335 BC016349 AK308998 AK307180 AK310987 |
|---|---|
| Distance: | 0 |
| Num_trans: | 92715 |
| All_trans: | HGNC:25199 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NM_001346387 |
| Entrez ID: | 92715 |
| Nearest Unigene: | Hs.292570 |
| Nearest Refseq: | NM_138778 |
| Nearest Ensembl: | ENSG00000148399 |
| Gene Name: | diphthamide biosynthesis 7 |
| Gene Alias: | C9orf112|RRT2|WDR85 |
| Gene Description: | diphthamide biosynthesis 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
