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Difference between revisions of "TSS:Hg 103402.1"

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Line 2: Line 2:
 
|BS69=
 
|BS69=
 
|MRD30=
 
|MRD30=
|all_trans=NM_001330057:0 NM_001370124:0 NM_001370122:0 NM_001202465:0 NM_001202466:0 NM_001370120:0 NM_001370116:0 NM_001370115:0 NM_001370113:0 NM_001370098:0 NM_001370107:0 NM_001370097:0 NM_001370106:0 NM_212479:0 AK294469:0 AK294781:0 AK312570:-46 ENST00000509513.6:-71 BC034784:-71 ENST00000381591.5:245 ENST00000309776.8:-290 ENST00000397959.7:-290 NM_006624:-290 NM_001370119:-290 NM_001370118:-290 NM_001370105:-290 ENST00000439456.5:-309 ENST00000397962.8:-309 NM_001370114:441 NM_001370111:441 NM_001370110:441 NM_001370099:441 NM_001370108:441 NM_001370104:-481 NR_163254:-481
+
|all_trans=HGNC:16966
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 24: Line 24:
 
|nearest_refseq=NM_006624
 
|nearest_refseq=NM_006624
 
|nearest_unigene=Hs.292265
 
|nearest_unigene=Hs.292265
|num_trans=35
+
|num_trans=10771
 
|species=human
 
|species=human
 
|start=134773
 
|start=134773
 
|start_of_center_position=134798
 
|start_of_center_position=134798
 
|strand=+
 
|strand=+
|transcript_name=NM_001330057 NM_001370124 NM_001370122 NM_001202465 NM_001202466 NM_001370120 NM_001370116 NM_001370115 NM_001370113 NM_001370098 NM_001370107 NM_001370097 NM_001370106 NM_212479 AK294469 AK294781
+
|transcript_name=AK294469 AK294781
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_103402.1
 
|tss_id=hg_103402.1

Latest revision as of 18:48, 19 July 2021

Basic information about the TSS


TSS ID:hg_103402.1
Species:human
Chr:chr10
TSS Classification:yes
Start:134773
End:134824
Strand:+
TSS Score:1
Start of the center position in the TSS region:134798
End of the center position in the TSS region:134799



Gene and protein annotation


Transcript_name:AK294469 AK294781
Distance:0
GeneID:10771
HGNC/MGI_ID:HGNC:16966
UniProt_ID:J3QKD2 Q15326 Q5UGI2
Gene_name:zinc finger MYND-type containing 11
Gene_symbol:ZMYND11
Gene_synonyms:BS69
Gene_source:HGNC:16966



Transcript annotation


Transcript_name:AK294469 AK294781
Distance:0
Num_trans:10771
All_trans:HGNC:16966



TATA-Box annotation


Distance to TSS:-1
Nearest PromoterID:NM_001370106
Entrez ID:10771
Nearest Unigene:Hs.292265
Nearest Refseq:NM_006624
Nearest Ensembl:ENSG00000015171
Gene Name:zinc finger MYND-type containing 11
Gene Alias:BRAM1|BS69|MRD30
Gene Description:zinc finger MYND-type containing 11
Gene Type:protein-coding
CpG%:0.105
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):