Difference between revisions of "TSS:Hg 103423.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:30724 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=5 | ||
| + | |end=650058 | ||
| + | |end_of_center_position=650040 | ||
|entrez_id=414235 | |entrez_id=414235 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
|gene_alias=C10orf108 | |gene_alias=C10orf108 | ||
|gene_description=proline rich 26 | |gene_description=proline rich 26 | ||
| − | |gene_name= | + | |gene_id=414235 |
| − | |gene_type= | + | |gene_name=DIP2C antisense RNA 1 |
| + | |gene_source=HGNC:30724 | ||
| + | |gene_symbol=DIP2C-AS1 | ||
| + | |gene_synonyms=FLJ38681 | ||
| + | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30724 | ||
|nearest_ensembl=ENSG00000180525 | |nearest_ensembl=ENSG00000180525 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001355390 |
|nearest_refseq=NM_001012714 | |nearest_refseq=NM_001012714 | ||
|nearest_unigene=Hs.587103 | |nearest_unigene=Hs.587103 | ||
| + | |num_trans=414235 | ||
| + | |species=human | ||
| + | |start=650021 | ||
| + | |start_of_center_position=650039 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK296168 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103423.1 | |tss_id=hg_103423.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DJP4 | ||
}} | }} | ||
Latest revision as of 18:48, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 650039 |
|---|---|
| End of the center position in the TSS region: | 650040 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK296168 |
|---|---|
| Distance: | 0 |
| Num_trans: | 414235 |
| All_trans: | HGNC:30724 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001355390 |
| Entrez ID: | 414235 |
| Nearest Unigene: | Hs.587103 |
| Nearest Refseq: | NM_001012714 |
| Nearest Ensembl: | ENSG00000180525 |
| Gene Name: | DIP2C antisense RNA 1 |
| Gene Alias: | C10orf108 |
| Gene Description: | proline rich 26 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
