Difference between revisions of "TSS:Hg 103436.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|IPPI1= | |IPPI1= | ||
| − | |all_trans= | + | |all_trans=HGNC:31406 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 7: | Line 7: | ||
|distance_to_tss=-143 | |distance_to_tss=-143 | ||
|end=1049542 | |end=1049542 | ||
| + | |end_of_center_position=1049510 | ||
|entrez_id=3422 | |entrez_id=3422 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=IPP1 | + | |gene_alias=IPP1{{!}}IPPI1 |
|gene_description=isopentenyl-diphosphate delta isomerase 1 | |gene_description=isopentenyl-diphosphate delta isomerase 1 | ||
|gene_id=22884 | |gene_id=22884 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_004508 | |nearest_refseq=NM_004508 | ||
|nearest_unigene=Hs.283652 | |nearest_unigene=Hs.283652 | ||
| − | |num_trans= | + | |num_trans=22884 |
|species=human | |species=human | ||
|start=1049476 | |start=1049476 | ||
| + | |start_of_center_position=1049509 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000358220.5 | + | |transcript_name=ENST00000358220.5 AB023199 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103436.1 | |tss_id=hg_103436.1 | ||
Latest revision as of 18:48, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 1049509 |
|---|---|
| End of the center position in the TSS region: | 1049510 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000358220.5 AB023199 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22884 |
| All_trans: | HGNC:31406 |
TATA-Box annotation
| Distance to TSS: | -143 |
|---|---|
| Nearest PromoterID: | NR_134301 |
| Entrez ID: | 3422 |
| Nearest Unigene: | Hs.283652 |
| Nearest Refseq: | NM_004508 |
| Nearest Ensembl: | ENSG00000067064 |
| Gene Name: | WD repeat domain 37 |
| Gene Alias: | IPP1|IPPI1 |
| Gene Description: | isopentenyl-diphosphate delta isomerase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
