Difference between revisions of "TSS:Hg 103480.1"
From referenceTSS
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|PFK-P= | |PFK-P= | ||
|PFKF= | |PFKF= | ||
| − | |all_trans= | + | |all_trans=HGNC:8878 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=19 | |distance=19 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-49 |
|end=3067501 | |end=3067501 | ||
|end_of_center_position=3067500 | |end_of_center_position=3067500 | ||
|entrez_id=5214 | |entrez_id=5214 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=ATP-PFK | + | |gene_alias=ATP-PFK{{!}}PFK-C{{!}}PFK-P{{!}}PFKF |
| − | |gene_description= | + | |gene_description=phosphofructokinase, platelet |
|gene_id=5214 | |gene_id=5214 | ||
| − | |gene_name= | + | |gene_name=phosphofructokinase, platelet |
|gene_source=HGNC:8878 | |gene_source=HGNC:8878 | ||
|gene_symbol=PFKP | |gene_symbol=PFKP | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:8878 | |hgnc_mgi_id=HGNC:8878 | ||
|nearest_ensembl=ENSG00000067057 | |nearest_ensembl=ENSG00000067057 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001323071 |
|nearest_refseq=NM_002627 | |nearest_refseq=NM_002627 | ||
|nearest_unigene=Hs.26010 | |nearest_unigene=Hs.26010 | ||
| − | |num_trans= | + | |num_trans=5214 |
|species=human | |species=human | ||
|start=3067497 | |start=3067497 | ||
|start_of_center_position=3067499 | |start_of_center_position=3067499 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC029138 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103480.1 | |tss_id=hg_103480.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:49, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 3067499 |
|---|---|
| End of the center position in the TSS region: | 3067500 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC029138 |
|---|---|
| Distance: | 19 |
| Num_trans: | 5214 |
| All_trans: | HGNC:8878 |
TATA-Box annotation
| Distance to TSS: | -49 |
|---|---|
| Nearest PromoterID: | NM_001323071 |
| Entrez ID: | 5214 |
| Nearest Unigene: | Hs.26010 |
| Nearest Refseq: | NM_002627 |
| Nearest Ensembl: | ENSG00000067057 |
| Gene Name: | phosphofructokinase, platelet |
| Gene Alias: | ATP-PFK|PFK-C|PFK-P|PFKF |
| Gene Description: | phosphofructokinase, platelet |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
