Difference between revisions of "TSS:Hg 103722.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:53170 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=0 | ||
|distance_to_tss=-41 | |distance_to_tss=-41 | ||
| + | |end=6737350 | ||
| + | |end_of_center_position=6737341 | ||
|entrez_id=108570035 | |entrez_id=108570035 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=lncRNA in | + | |gene_description=lncRNA in non-homologous end joining pathway 1 |
| − | |gene_name=LINP1 | + | |gene_id= |
| + | |gene_name=lncRNA in non-homologous end joining pathway 1 | ||
| + | |gene_source=HGNC:53170 | ||
| + | |gene_symbol=LINP1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:53170 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_138480 | |nearest_promoter_id=NR_138480 | ||
|nearest_refseq=NR_138480 | |nearest_refseq=NR_138480 | ||
|nearest_unigene=Hs.568834 | |nearest_unigene=Hs.568834 | ||
| + | |num_trans= | ||
| + | |species=human | ||
| + | |start=6737331 | ||
| + | |start_of_center_position=6737340 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000649087.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103722.1 | |tss_id=hg_103722.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:54, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6737340 |
|---|---|
| End of the center position in the TSS region: | 6737341 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000649087.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | |
| All_trans: | HGNC:53170 |
TATA-Box annotation
| Distance to TSS: | -41 |
|---|---|
| Nearest PromoterID: | NR_138480 |
| Entrez ID: | 108570035 |
| Nearest Unigene: | Hs.568834 |
| Nearest Refseq: | NR_138480 |
| Nearest Ensembl: | |
| Gene Name: | lncRNA in non-homologous end joining pathway 1 |
| Gene Alias: | - |
| Gene Description: | lncRNA in non-homologous end joining pathway 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
