Difference between revisions of "TSS:Hg 103768.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=71 |entrez_id=509 |gc_percent=0.656716 |gene_alias=ATP5C|ATP5CL1 |gene_description="ATP synthase, H+ transporting, mitochondria...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |ATP5CL1= | ||
| + | |all_trans=HGNC:833 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-2 | ||
| + | |end=7788188 | ||
| + | |end_of_center_position=7788176 | ||
|entrez_id=509 | |entrez_id=509 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=ATP5C | + | |gene_alias=ATP5C{{!}}ATP5C1{{!}}ATP5CL1 |
| − | |gene_description= | + | |gene_description=ATP synthase F1 subunit gamma |
| − | |gene_name= | + | |gene_id=509 |
| + | |gene_name=ATP synthase F1 subunit gamma | ||
| + | |gene_source=HGNC:833 | ||
| + | |gene_symbol=ATP5F1C | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:833 | ||
|nearest_ensembl=ENSG00000165629 | |nearest_ensembl=ENSG00000165629 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001001973 |
|nearest_refseq=NM_005174 | |nearest_refseq=NM_005174 | ||
|nearest_unigene=Hs.271135 | |nearest_unigene=Hs.271135 | ||
| + | |num_trans=509 | ||
| + | |species=human | ||
| + | |start=7788162 | ||
| + | |start_of_center_position=7788175 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000460362.5 ENST00000356708.12 ENST00000335698.4 ENST00000465936.5 ENST00000460820.6 BC020824 AK292896 AK296803 D16562 D16563 BC016812 AK294061 BC010380 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103768.1 | |tss_id=hg_103768.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DFE6 B4DL14 P36542 Q8TAS0 | ||
}} | }} | ||
Latest revision as of 18:55, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 7788175 |
|---|---|
| End of the center position in the TSS region: | 7788176 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000460362.5 ENST00000356708.12 ENST00000335698.4 ENST00000465936.5 ENST00000460820.6 BC020824 AK292896 AK296803 D16562 D16563 BC016812 AK294061 BC010380 |
|---|---|
| Distance: | 0 |
| Num_trans: | 509 |
| All_trans: | HGNC:833 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_001001973 |
| Entrez ID: | 509 |
| Nearest Unigene: | Hs.271135 |
| Nearest Refseq: | NM_005174 |
| Nearest Ensembl: | ENSG00000165629 |
| Gene Name: | ATP synthase F1 subunit gamma |
| Gene Alias: | ATP5C|ATP5C1|ATP5CL1 |
| Gene Description: | ATP synthase F1 subunit gamma |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
