Difference between revisions of "TSS:Hg 103790.1"
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{{TSSDetail | {{TSSDetail | ||
|HDRS= | |HDRS= | ||
| − | |all_trans= | + | |all_trans=HGNC:4172 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-5 |
|end=8054697 | |end=8054697 | ||
|end_of_center_position=8054683 | |end_of_center_position=8054683 | ||
|entrez_id=2625 | |entrez_id=2625 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=HDR | + | |gene_alias=HDR{{!}}HDRS |
|gene_description=GATA binding protein 3 | |gene_description=GATA binding protein 3 | ||
|gene_id=2625 | |gene_id=2625 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:4172 | |hgnc_mgi_id=HGNC:4172 | ||
|nearest_ensembl=ENSG00000107485 | |nearest_ensembl=ENSG00000107485 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001002295 |
|nearest_refseq=NM_002051 | |nearest_refseq=NM_002051 | ||
|nearest_unigene=Hs.524134 | |nearest_unigene=Hs.524134 | ||
| − | |num_trans= | + | |num_trans=2625 |
|species=human | |species=human | ||
|start=8054668 | |start=8054668 | ||
|start_of_center_position=8054682 | |start_of_center_position=8054682 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000379328. | + | |transcript_name=ENST00000379328.9 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103790.1 | |tss_id=hg_103790.1 | ||
Latest revision as of 18:56, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 8054682 |
|---|---|
| End of the center position in the TSS region: | 8054683 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000379328.9 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2625 |
| All_trans: | HGNC:4172 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_001002295 |
| Entrez ID: | 2625 |
| Nearest Unigene: | Hs.524134 |
| Nearest Refseq: | NM_002051 |
| Nearest Ensembl: | ENSG00000107485 |
| Gene Name: | GATA binding protein 3 |
| Gene Alias: | HDR|HDRS |
| Gene Description: | GATA binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
