Difference between revisions of "TSS:Hg 103830.1"
From referenceTSS
| Line 34: | Line 34: | ||
|strand=+ | |strand=+ | ||
|tata_box=0(TTTTTTAAAGAG,+,0.00) | |tata_box=0(TTTTTTAAAGAG,+,0.00) | ||
| − | |transcript_name= | + | |transcript_name=NM_001326317.2 NM_001326318.2 NM_001326321.2 NM_001326319.2 NM_001326320.2 NM_001326323.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103830.1 | |tss_id=hg_103830.1 | ||
Latest revision as of 18:57, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 10462648 |
|---|---|
| End of the center position in the TSS region: | 10462649 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001326317.2 NM_001326318.2 NM_001326321.2 NM_001326319.2 NM_001326320.2 NM_001326323.2 |
|---|---|
| Distance: | -90 |
| Num_trans: | 6 |
| All_trans: | NM_001326323:-90 NM_001326319:-90 NM_001326318:-90 NM_001326317:-90 NM_001326321:-90 NM_001326320:-90 |
TATA-Box annotation
| Distance to TSS: | 98 |
|---|---|
| Nearest PromoterID: | NM_001326320 |
| Entrez ID: | 10659 |
| Nearest Unigene: | Hs.309288 |
| Nearest Refseq: | NM_006561 |
| Nearest Ensembl: | ENSG00000048740 |
| Gene Name: | CUGBP Elav-like family member 2 |
| Gene Alias: | BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR |
| Gene Description: | CUGBP Elav-like family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 0(TTTTTTAAAGAG,+,0.00) |
