Difference between revisions of "TSS:Hg 103834.1"
From referenceTSS
| Line 6: | Line 6: | ||
|ETR3= | |ETR3= | ||
|NAPOR= | |NAPOR= | ||
| − | |all_trans= | + | |all_trans=HGNC:2550 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_006561 | |nearest_refseq=NM_006561 | ||
|nearest_unigene=Hs.309288 | |nearest_unigene=Hs.309288 | ||
| − | |num_trans= | + | |num_trans=10659 |
|species=human | |species=human | ||
|start=10798570 | |start=10798570 | ||
Latest revision as of 18:57, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 10798575 |
|---|---|
| End of the center position in the TSS region: | 10798576 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000638035.1 |
|---|---|
| Distance: | 35 |
| Num_trans: | 10659 |
| All_trans: | HGNC:2550 |
TATA-Box annotation
| Distance to TSS: | -149 |
|---|---|
| Nearest PromoterID: | NM_001326328 |
| Entrez ID: | 10659 |
| Nearest Unigene: | Hs.309288 |
| Nearest Refseq: | NM_006561 |
| Nearest Ensembl: | ENSG00000048740 |
| Gene Name: | CUGBP Elav-like family member 2 |
| Gene Alias: | BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR |
| Gene Description: | CUGBP Elav-like family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(GGGCTTTAAAAG,-,0.00),-35(GGCTTTAAAAGG,-,0.00),-34(GCTTTAAAAGGT,+,0.00) |
