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Difference between revisions of "TSS:Hg 103869.1"

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Line 6: Line 6:
 
|ETR3=
 
|ETR3=
 
|NAPOR=
 
|NAPOR=
|all_trans=AK295511:0 ENST00000354897.3:-37 uc057rqx.1:-37 ENST00000609870.5:-39 ENST00000609692.5:-39 uc057rqv.1:-39 uc057rqw.1:-39 AK310038:-39 AK302681:-39 AK304216:-67 AK316354:-245 AF432906:-345 ENST00000608830.5:-383 uc031vxe.2:-383 AK293164:-383 AF036956:-409 AK299992:-426 AK297313:-432 ENST00000399850.7:-493 ENST00000417956.6:-493 NM_001025076:-493 NM_001083591:-493 uc057rqu.1:-493 uc031vxf.2:-493
+
|all_trans=HGNC:2550
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.055
 
|cpg_percent=0.055
Line 15: Line 15:
 
|entrez_id=10659
 
|entrez_id=10659
 
|gc_percent=0.527363
 
|gc_percent=0.527363
|gene_alias=BRUNOL3
+
|gene_alias=BRUNOL3{{!}}CELF-2{{!}}CUG-BP2{{!}}CUGBP2{{!}}ETR-3{{!}}ETR3{{!}}NAPOR
|gene_description="CUGBP, Elav-like family member 2"
+
|gene_description=CUGBP Elav-like family member 2
 
|gene_id=10659
 
|gene_id=10659
|gene_name="CUGBP, Elav-like family member 2"
+
|gene_name=CUGBP Elav-like family member 2
 
|gene_source=HGNC:2550
 
|gene_source=HGNC:2550
 
|gene_symbol=CELF2
 
|gene_symbol=CELF2
Line 28: Line 28:
 
|nearest_refseq=NM_006561
 
|nearest_refseq=NM_006561
 
|nearest_unigene=Hs.309288
 
|nearest_unigene=Hs.309288
|num_trans=24
+
|num_trans=10659
 
|species=human
 
|species=human
 
|start=11165522
 
|start=11165522

Latest revision as of 18:58, 19 July 2021

Basic information about the TSS


TSS ID:hg_103869.1
Species:human
Chr:chr10
TSS Classification:yes
Start:11165522
End:11165533
Strand:+
TSS Score:1
Start of the center position in the TSS region:11165527
End of the center position in the TSS region:11165528



Gene and protein annotation


Transcript_name:AK295511
Distance:0
GeneID:10659
HGNC/MGI_ID:HGNC:2550
UniProt_ID:B4DIB6
Gene_name:CUGBP Elav-like family member 2
Gene_symbol:CELF2
Gene_synonyms:BRUNOL3 Etr-3 NAPOR-2
Gene_source:HGNC:2550



Transcript annotation


Transcript_name:AK295511
Distance:0
Num_trans:10659
All_trans:HGNC:2550



TATA-Box annotation


Distance to TSS:498
Nearest PromoterID:NM_001083591
Entrez ID:10659
Nearest Unigene:Hs.309288
Nearest Refseq:NM_006561
Nearest Ensembl:ENSG00000048740
Gene Name:CUGBP Elav-like family member 2
Gene Alias:BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR
Gene Description:CUGBP Elav-like family member 2
Gene Type:protein-coding
CpG%:0.055
GC%:0.527363
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):