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Difference between revisions of "TSS:Hg 10387.1"

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Line 4: Line 4:
 
|SDR1=
 
|SDR1=
 
|SDR16C1=
 
|SDR16C1=
|all_trans=AK310202:0 AY358093:-4 AK309282:-48 AK312961:-52 ENST00000616661.4:-97 NM_004753:-97 uc031tpa.2:-97 BX648476:-97 BC002730:165 AK222593:226 AF061741:227 CU678154:279 KJ897985:280 DQ893006:280 DQ896252:280 DQ426869:285
+
|all_trans=HGNC:17693
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.025
 
|cpg_percent=0.025
 
|distance=0
 
|distance=0
|distance_to_tss=100
+
|distance_to_tss=579
 
|end=12617634
 
|end=12617634
 +
|end_of_center_position=12617631
 
|entrez_id=9249
 
|entrez_id=9249
 
|gc_percent=0.452736
 
|gc_percent=0.452736
|gene_alias=DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1
+
|gene_alias=DD83.1{{!}}RDH17{{!}}Rsdr1{{!}}SDR1{{!}}SDR16C1{{!}}retSDR1
 
|gene_description=dehydrogenase/reductase 3
 
|gene_description=dehydrogenase/reductase 3
 
|gene_id=9249
 
|gene_id=9249
|gene_name=dehydrogenase/reductase (SDR family) member 3
+
|gene_name=dehydrogenase/reductase 3
 
|gene_source=HGNC:17693
 
|gene_source=HGNC:17693
 
|gene_symbol=DHRS3
 
|gene_symbol=DHRS3
Line 25: Line 26:
 
|nearest_refseq=NM_004753
 
|nearest_refseq=NM_004753
 
|nearest_unigene=Hs.289347
 
|nearest_unigene=Hs.289347
|num_trans=16
+
|num_trans=9249
 
|retSDR1=
 
|retSDR1=
 
|species=human
 
|species=human
 
|start=12617627
 
|start=12617627
 +
|start_of_center_position=12617630
 
|strand=-
 
|strand=-
 
|transcript_name=AK310202
 
|transcript_name=AK310202

Latest revision as of 18:58, 19 July 2021

Basic information about the TSS


TSS ID:hg_10387.1
Species:human
Chr:chr1
TSS Classification:yes
Start:12617627
End:12617634
Strand:-
TSS Score:1
Start of the center position in the TSS region:12617630
End of the center position in the TSS region:12617631



Gene and protein annotation


Transcript_name:AK310202
Distance:0
GeneID:9249
HGNC/MGI_ID:HGNC:17693
UniProt_ID:
Gene_name:dehydrogenase/reductase 3
Gene_symbol:DHRS3
Gene_synonyms:RDH17 Rsdr1 SDR1 SDR16C1 retSDR1
Gene_source:HGNC:17693



Transcript annotation


Transcript_name:AK310202
Distance:0
Num_trans:9249
All_trans:HGNC:17693



TATA-Box annotation


Distance to TSS:579
Nearest PromoterID:NM_004753
Entrez ID:9249
Nearest Unigene:Hs.289347
Nearest Refseq:NM_004753
Nearest Ensembl:ENSG00000162496
Gene Name:dehydrogenase/reductase 3
Gene Alias:DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1
Gene Description:dehydrogenase/reductase 3
Gene Type:protein-coding
CpG%:0.025
GC%:0.452736
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):