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Difference between revisions of "TSS:Hg 10388.1"

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Line 4: Line 4:
 
|SDR1=
 
|SDR1=
 
|SDR16C1=
 
|SDR16C1=
|all_trans=AK312961:0 AK309282:0 BX648476:-30 AY358093:33 AK310202:38 BC002730:208 AK222593:269 AF061741:270 CU678154:322 KJ897985:323 DQ893006:323 DQ896252:323 DQ426869:328
+
|all_trans=HGNC:17693
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 26: Line 26:
 
|nearest_refseq=NM_004753
 
|nearest_refseq=NM_004753
 
|nearest_unigene=Hs.289347
 
|nearest_unigene=Hs.289347
|num_trans=13
+
|num_trans=9249
 
|retSDR1=
 
|retSDR1=
 
|species=human
 
|species=human

Latest revision as of 18:58, 19 July 2021

Basic information about the TSS


TSS ID:hg_10388.1
Species:human
Chr:chr1
TSS Classification:yes
Start:12617670
End:12617701
Strand:-
TSS Score:1
Start of the center position in the TSS region:12617685
End of the center position in the TSS region:12617686



Gene and protein annotation


Transcript_name:AK312961 AK309282
Distance:0
GeneID:9249
HGNC/MGI_ID:HGNC:17693
UniProt_ID:
Gene_name:dehydrogenase/reductase 3
Gene_symbol:DHRS3
Gene_synonyms:RDH17 Rsdr1 SDR1 SDR16C1 retSDR1
Gene_source:HGNC:17693



Transcript annotation


Transcript_name:AK312961 AK309282
Distance:0
Num_trans:9249
All_trans:HGNC:17693



TATA-Box annotation


Distance to TSS:524
Nearest PromoterID:NM_004753
Entrez ID:9249
Nearest Unigene:Hs.289347
Nearest Refseq:NM_004753
Nearest Ensembl:ENSG00000162496
Gene Name:dehydrogenase/reductase 3
Gene Alias:DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1
Gene Description:dehydrogenase/reductase 3
Gene Type:protein-coding
CpG%:0.05
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):