Difference between revisions of "TSS:Hg 103883.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=23830 |entrez_id=414196 |gc_percent=0.427861 |gene_alias=C10orf31 |gene_description=CELF2 antisense RNA 1 |gene_name=CELF2-AS1...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:2550 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=224 | ||
|distance_to_tss=23830 | |distance_to_tss=23830 | ||
| + | |end=11320846 | ||
| + | |end_of_center_position=11320845 | ||
|entrez_id=414196 | |entrez_id=414196 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=C10orf31 | |gene_alias=C10orf31 | ||
|gene_description=CELF2 antisense RNA 1 | |gene_description=CELF2 antisense RNA 1 | ||
| − | |gene_name=CELF2- | + | |gene_id=10659 |
| + | |gene_name=CUGBP Elav-like family member 2 | ||
| + | |gene_source=HGNC:2550 | ||
| + | |gene_symbol=CELF2 | ||
| + | |gene_synonyms=BRUNOL3 Etr-3 NAPOR-2 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:2550 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_126062 | |nearest_promoter_id=NR_126062 | ||
|nearest_refseq=NM_001012713 | |nearest_refseq=NM_001012713 | ||
|nearest_unigene=Hs.729598 | |nearest_unigene=Hs.729598 | ||
| − | |tata_box= | + | |num_trans=10659 |
| + | |species=human | ||
| + | |start=11320842 | ||
| + | |start_of_center_position=11320844 | ||
| + | |strand=+ | ||
| + | |tata_box=-78(CCTCAAAGAGCC,+,0.00) | ||
| + | |transcript_name=AF086447 | ||
| + | |tss_classification=no | ||
|tss_id=hg_103883.1 | |tss_id=hg_103883.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:58, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11320844 |
|---|---|
| End of the center position in the TSS region: | 11320845 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF086447 |
|---|---|
| Distance: | 224 |
| Num_trans: | 10659 |
| All_trans: | HGNC:2550 |
TATA-Box annotation
| Distance to TSS: | 23830 |
|---|---|
| Nearest PromoterID: | NR_126062 |
| Entrez ID: | 414196 |
| Nearest Unigene: | Hs.729598 |
| Nearest Refseq: | NM_001012713 |
| Nearest Ensembl: | |
| Gene Name: | CUGBP Elav-like family member 2 |
| Gene Alias: | C10orf31 |
| Gene Description: | CELF2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -78(CCTCAAAGAGCC,+,0.00) |
