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Difference between revisions of "TSS:Hg 103898.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000379215.8:0 ENST00000496136.5:0 ENST00000420401.5:0 uc001ikw.5:0 uc057rrg.1:0 uc057rrh.1:0 AF275677:0 AF289604:0 AK222511:0 AK290902:0 BC009617:0 AK024562:0 NM_024693:-5 KJ899561:128 BC001091:178
+
|all_trans=HGNC:23489
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.145
 
|cpg_percent=0.145
 
|distance=0
 
|distance=0
|distance_to_tss=48
+
|distance_to_tss=23
 
|end=11742449
 
|end=11742449
 
|end_of_center_position=11742406
 
|end_of_center_position=11742406
Line 22: Line 22:
 
|nearest_refseq=NM_024693
 
|nearest_refseq=NM_024693
 
|nearest_unigene=Hs.22242
 
|nearest_unigene=Hs.22242
|num_trans=15
+
|num_trans=79746
 
|species=human
 
|species=human
 
|start=11742361
 
|start=11742361
 
|start_of_center_position=11742405
 
|start_of_center_position=11742405
 
|strand=+
 
|strand=+
|transcript_name=ENST00000379215.8 ENST00000496136.5 ENST00000420401.5 uc001ikw.5 uc057rrg.1 uc057rrh.1 AF275677 AF289604 AK222511 AK290902 BC009617 AK024562
+
|transcript_name=ENST00000496136.5 ENST00000379215.9 ENST00000420401.5 AF275677 AF289604 AK222511 AK290902 BC009617 AK024562
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_103898.1
 
|tss_id=hg_103898.1

Latest revision as of 18:58, 19 July 2021

Basic information about the TSS


TSS ID:hg_103898.1
Species:human
Chr:chr10
TSS Classification:yes
Start:11742361
End:11742449
Strand:+
TSS Score:1
Start of the center position in the TSS region:11742405
End of the center position in the TSS region:11742406



Gene and protein annotation


Transcript_name:ENST00000496136.5 ENST00000379215.9 ENST00000420401.5 AF275677 AF289604 AK222511 AK290902 BC009617 AK024562
Distance:0
GeneID:79746
HGNC/MGI_ID:HGNC:23489
UniProt_ID:Q5W0J8 Q96DC8
Gene_name:enoyl-CoA hydratase domain containing 3
Gene_symbol:ECHDC3
Gene_synonyms:FLJ20909
Gene_source:HGNC:23489



Transcript annotation


Transcript_name:ENST00000496136.5 ENST00000379215.9 ENST00000420401.5 AF275677 AF289604 AK222511 AK290902 BC009617 AK024562
Distance:0
Num_trans:79746
All_trans:HGNC:23489



TATA-Box annotation


Distance to TSS:23
Nearest PromoterID:NM_024693
Entrez ID:79746
Nearest Unigene:Hs.22242
Nearest Refseq:NM_024693
Nearest Ensembl:ENSG00000134463
Gene Name:enoyl-CoA hydratase domain containing 3
Gene Alias:-
Gene Description:enoyl-CoA hydratase domain containing 3
Gene Type:protein-coding
CpG%:0.145
GC%:0.79602
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):