Difference between revisions of "TSS:Hg 103911.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|D123= | |D123= | ||
| − | |all_trans= | + | |all_trans=HGNC:16827 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance= | + | |distance=43 |
| − | |distance_to_tss=- | + | |distance_to_tss=-25 |
|end=12195922 | |end=12195922 | ||
| − | |entrez_id= | + | |end_of_center_position=12195916 |
| + | |entrez_id=11164 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias= | + | |gene_alias=YSA1{{!}}YSA1H{{!}}YSAH1{{!}}hNUDT5 |
| − | |gene_description= | + | |gene_description=nudix hydrolase 5 |
|gene_id=8872 | |gene_id=8872 | ||
|gene_name=cell division cycle 123 | |gene_name=cell division cycle 123 | ||
| Line 18: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:16827 | |hgnc_mgi_id=HGNC:16827 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000165609 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_014142 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_014142 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.555956 |
| − | |num_trans= | + | |num_trans=8872 |
|species=human | |species=human | ||
|start=12195909 | |start=12195909 | ||
| + | |start_of_center_position=12195915 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000429258.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103911.1 | |tss_id=hg_103911.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=X6RKY7 |
}} | }} | ||
Latest revision as of 18:58, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12195915 |
|---|---|
| End of the center position in the TSS region: | 12195916 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000429258.6 |
|---|---|
| Distance: | 43 |
| Num_trans: | 8872 |
| All_trans: | HGNC:16827 |
TATA-Box annotation
| Distance to TSS: | -25 |
|---|---|
| Nearest PromoterID: | NM_014142 |
| Entrez ID: | 11164 |
| Nearest Unigene: | Hs.555956 |
| Nearest Refseq: | NM_014142 |
| Nearest Ensembl: | ENSG00000165609 |
| Gene Name: | cell division cycle 123 |
| Gene Alias: | YSA1|YSA1H|YSAH1|hNUDT5 |
| Gene Description: | nudix hydrolase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
