Difference between revisions of "TSS:Hg 103987.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:17287 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| − | |distance= | + | |distance=14 |
|distance_to_tss=17 | |distance_to_tss=17 | ||
|end=14878806 | |end=14878806 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:17287 | |hgnc_mgi_id=HGNC:17287 | ||
|nearest_ensembl=ENSG00000152455 | |nearest_ensembl=ENSG00000152455 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001193426 |
|nearest_refseq=NM_024670 | |nearest_refseq=NM_024670 | ||
|nearest_unigene=Hs.554883 | |nearest_unigene=Hs.554883 | ||
| − | |num_trans= | + | |num_trans=79723 |
|species=human | |species=human | ||
|start=14878794 | |start=14878794 | ||
|start_of_center_position=14878800 | |start_of_center_position=14878800 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000378331.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103987.1 | |tss_id=hg_103987.1 | ||
Latest revision as of 19:00, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 14878800 |
|---|---|
| End of the center position in the TSS region: | 14878801 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000378331.5 |
|---|---|
| Distance: | 14 |
| Num_trans: | 79723 |
| All_trans: | HGNC:17287 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_001193426 |
| Entrez ID: | 79723 |
| Nearest Unigene: | Hs.554883 |
| Nearest Refseq: | NM_024670 |
| Nearest Ensembl: | ENSG00000152455 |
| Gene Name: | suppressor of variegation 3-9 homolog 2 |
| Gene Alias: | KMT1B |
| Gene Description: | suppressor of variegation 3-9 homolog 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
