Difference between revisions of "TSS:Hg 104161.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:24331 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=239473 | |distance_to_tss=239473 | ||
|end=19489099 | |end=19489099 | ||
| + | |end_of_center_position=19489078 | ||
|entrez_id=101928834 | |entrez_id=101928834 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_120646 | |nearest_refseq=NR_120646 | ||
|nearest_unigene=Hs.676482 | |nearest_unigene=Hs.676482 | ||
| − | |num_trans= | + | |num_trans=340895 |
|species=human | |species=human | ||
|start=19489055 | |start=19489055 | ||
| + | |start_of_center_position=19489077 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000377265.3 | + | |transcript_name=ENST00000377265.3 AK297683 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104161.1 | |tss_id=hg_104161.1 | ||
Latest revision as of 19:04, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19489077 |
|---|---|
| End of the center position in the TSS region: | 19489078 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377265.3 AK297683 |
|---|---|
| Distance: | 0 |
| Num_trans: | 340895 |
| All_trans: | HGNC:24331 |
TATA-Box annotation
| Distance to TSS: | 239473 |
|---|---|
| Nearest PromoterID: | NR_120646 |
| Entrez ID: | 101928834 |
| Nearest Unigene: | Hs.676482 |
| Nearest Refseq: | NR_120646 |
| Nearest Ensembl: | ENSG00000233968 |
| Gene Name: | MAM and LDL receptor class A domain containing 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101928834 |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
