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Difference between revisions of "TSS:Hg 104172.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC012885:-69 AF378757:161 CU680430:167 KJ903482:167 AY358486:-463 AK304591:-469 ENST00000377252.5:-474 NM_032812:-474 NM_001282736:-474
+
|all_trans=HGNC:21013
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 22: Line 22:
 
|nearest_refseq=NM_032812
 
|nearest_refseq=NM_032812
 
|nearest_unigene=Hs.99472
 
|nearest_unigene=Hs.99472
|num_trans=9
+
|num_trans=84898
 
|species=human
 
|species=human
 
|start=19816905
 
|start=19816905

Latest revision as of 19:04, 19 July 2021

Basic information about the TSS


TSS ID:hg_104172.1
Species:human
Chr:chr10
TSS Classification:yes
Start:19816905
End:19816910
Strand:+
TSS Score:1
Start of the center position in the TSS region:19816907
End of the center position in the TSS region:19816908



Gene and protein annotation


Transcript_name:BC012885
Distance:-69
GeneID:84898
HGNC/MGI_ID:HGNC:21013
UniProt_ID:
Gene_name:plexin domain containing 2
Gene_symbol:PLXDC2
Gene_synonyms:FLJ14623 TEM7R
Gene_source:HGNC:21013



Transcript annotation


Transcript_name:BC012885
Distance:-69
Num_trans:84898
All_trans:HGNC:21013



TATA-Box annotation


Distance to TSS:476
Nearest PromoterID:NM_001282736
Entrez ID:84898
Nearest Unigene:Hs.99472
Nearest Refseq:NM_032812
Nearest Ensembl:ENSG00000120594
Gene Name:plexin domain containing 2
Gene Alias:TEM7R
Gene Description:plexin domain containing 2
Gene Type:protein-coding
CpG%:0.1
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):