Difference between revisions of "TSS:Hg 104235.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=90 |entrez_id=100532731 |gc_percent=0.646766 |gene_alias=- |gene_description=COMMD3-BMI1 readthrough |gene_name=COMMD3-BMI1 |ge...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:48326 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance_to_tss= | + | |distance=-16 |
| − | |entrez_id= | + | |distance_to_tss=85 |
| + | |end=22316479 | ||
| + | |end_of_center_position=22316474 | ||
| + | |entrez_id=23412 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias= | + | |gene_alias=BUP{{!}}C10orf8 |
| − | |gene_description=COMMD3-BMI1 readthrough | + | |gene_description=COMM domain containing 3 |
| − | | | + | |gene_id=100532731 |
| + | |gene_name=COMMD3-BMI1 readthrough | ||
| + | |gene_source=HGNC:48326 | ||
| + | |gene_symbol=COMMD3-BMI1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:48326 |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000148444 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NM_012071 |
| − | |nearest_unigene=Hs. | + | |nearest_refseq=NM_012071 |
| + | |nearest_unigene=Hs.534398 | ||
| + | |num_trans=100532731 | ||
| + | |species=human | ||
| + | |start=22316467 | ||
| + | |start_of_center_position=22316473 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000417470.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104235.1 | |tss_id=hg_104235.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T8Z1 | ||
}} | }} | ||
Latest revision as of 19:05, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22316473 |
|---|---|
| End of the center position in the TSS region: | 22316474 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000417470.1 |
|---|---|
| Distance: | -16 |
| Num_trans: | 100532731 |
| All_trans: | HGNC:48326 |
TATA-Box annotation
| Distance to TSS: | 85 |
|---|---|
| Nearest PromoterID: | NM_012071 |
| Entrez ID: | 23412 |
| Nearest Unigene: | Hs.534398 |
| Nearest Refseq: | NM_012071 |
| Nearest Ensembl: | ENSG00000148444 |
| Gene Name: | COMMD3-BMI1 readthrough |
| Gene Alias: | BUP|C10orf8 |
| Gene Description: | COMM domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
