Difference between revisions of "TSS:Hg 104298.1"
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NM_001098500:82 ENST00000376462.5:101 AB033043:101 ENST00000481700.1:137 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=82 |
| − | |distance_to_tss=- | + | |distance_to_tss=-88 |
|end=23694645 | |end=23694645 | ||
|end_of_center_position=23694640 | |end_of_center_position=23694640 | ||
|entrez_id=56243 | |entrez_id=56243 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=SKT | + | |gene_alias=ETL4{{!}}SKT |
|gene_description=KIAA1217 | |gene_description=KIAA1217 | ||
|gene_id=56243 | |gene_id=56243 | ||
| Line 15: | Line 15: | ||
|gene_source=HGNC:25428 | |gene_source=HGNC:25428 | ||
|gene_symbol=KIAA1217 | |gene_symbol=KIAA1217 | ||
| − | |gene_synonyms=DKFZP761L0424 SKT | + | |gene_synonyms=DKFZP761L0424 ETL4 SKT |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:25428 | |hgnc_mgi_id=HGNC:25428 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_019590 | |nearest_refseq=NM_019590 | ||
|nearest_unigene=Hs.445885 | |nearest_unigene=Hs.445885 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=23694633 | |start=23694633 | ||
|start_of_center_position=23694639 | |start_of_center_position=23694639 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001098500.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104298.1 | |tss_id=hg_104298.1 | ||
Latest revision as of 19:07, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 23694639 |
|---|---|
| End of the center position in the TSS region: | 23694640 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001098500.3 |
|---|---|
| Distance: | 82 |
| Num_trans: | 4 |
| All_trans: | NM_001098500:82 ENST00000376462.5:101 AB033043:101 ENST00000481700.1:137 |
TATA-Box annotation
| Distance to TSS: | -88 |
|---|---|
| Nearest PromoterID: | NM_001098500 |
| Entrez ID: | 56243 |
| Nearest Unigene: | Hs.445885 |
| Nearest Refseq: | NM_019590 |
| Nearest Ensembl: | ENSG00000120549 |
| Gene Name: | KIAA1217 |
| Gene Alias: | ETL4|SKT |
| Gene Description: | KIAA1217 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
