Difference between revisions of "TSS:Hg 104322.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:25428 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-20320 | |distance_to_tss=-20320 | ||
|end=24255375 | |end=24255375 | ||
| + | |end_of_center_position=24255366 | ||
|entrez_id=693188 | |entrez_id=693188 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=MIRN603 | + | |gene_alias=MIRN603{{!}}hsa-mir-603 |
|gene_description=microRNA 603 | |gene_description=microRNA 603 | ||
|gene_id=56243 | |gene_id=56243 | ||
| Line 14: | Line 15: | ||
|gene_source=HGNC:25428 | |gene_source=HGNC:25428 | ||
|gene_symbol=KIAA1217 | |gene_symbol=KIAA1217 | ||
| − | |gene_synonyms=DKFZP761L0424 SKT | + | |gene_synonyms=DKFZP761L0424 ETL4 SKT |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:25428 | |hgnc_mgi_id=HGNC:25428 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NR_030334 | |nearest_refseq=NR_030334 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=56243 |
|species=human | |species=human | ||
|start=24255355 | |start=24255355 | ||
| + | |start_of_center_position=24255365 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=88(GAACATTAAAGG,-,0.00) |
|transcript_name=AK303905 | |transcript_name=AK303905 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 19:07, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24255365 |
|---|---|
| End of the center position in the TSS region: | 24255366 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK303905 |
|---|---|
| Distance: | -28 |
| Num_trans: | 56243 |
| All_trans: | HGNC:25428 |
TATA-Box annotation
| Distance to TSS: | -20320 |
|---|---|
| Nearest PromoterID: | NR_030334 |
| Entrez ID: | 693188 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030334 |
| Nearest Ensembl: | ENSG00000207930 |
| Gene Name: | KIAA1217 |
| Gene Alias: | MIRN603|hsa-mir-603 |
| Gene Description: | microRNA 603 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 88(GAACATTAAAGG,-,0.00) |
