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Difference between revisions of "TSS:Hg 104393.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000428517.2:9 BC029517:9 M81882:34 ENST00000259271.7:-49 M74826:-49 ENST00000376261.8:50 NM_001134366:50 BC126327:61 BC126329:61 AB527954:86 HQ258311:86 X69936:101 BC039038:-208 BC047899:-230 NM_000818:-407 ENST00000648567.1:421
+
|all_trans=HGNC:4093
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.135
 
|cpg_percent=0.135
Line 22: Line 22:
 
|nearest_refseq=NM_000818
 
|nearest_refseq=NM_000818
 
|nearest_unigene=Hs.231829
 
|nearest_unigene=Hs.231829
|num_trans=16
+
|num_trans=2572
 
|species=human
 
|species=human
 
|start=26216713
 
|start=26216713

Latest revision as of 19:09, 19 July 2021

Basic information about the TSS


TSS ID:hg_104393.1
Species:human
Chr:chr10
TSS Classification:yes
Start:26216713
End:26216724
Strand:+
TSS Score:1
Start of the center position in the TSS region:26216718
End of the center position in the TSS region:26216719



Gene and protein annotation


Transcript_name:ENST00000428517.2 BC029517
Distance:9
GeneID:2572
HGNC/MGI_ID:HGNC:4093
UniProt_ID:Q4G154 Q5VZ31
Gene_name:glutamate decarboxylase 2
Gene_symbol:GAD2
Gene_synonyms:GAD65
Gene_source:HGNC:4093



Transcript annotation


Transcript_name:ENST00000428517.2 BC029517
Distance:9
Num_trans:2572
All_trans:HGNC:4093



TATA-Box annotation


Distance to TSS:-55
Nearest PromoterID:NM_001134366
Entrez ID:2572
Nearest Unigene:Hs.231829
Nearest Refseq:NM_000818
Nearest Ensembl:ENSG00000136750
Gene Name:glutamate decarboxylase 2
Gene Alias:GAD65
Gene Description:glutamate decarboxylase 2
Gene Type:protein-coding
CpG%:0.135
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):