Difference between revisions of "TSS:Hg 104408.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |PREL1= | ||
| + | |RARP1= | ||
| + | |RIAM= | ||
| + | |all_trans=HGNC:17379 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=14 | ||
| + | |end=26438393 | ||
| + | |end_of_center_position=26438356 | ||
|entrez_id=54518 | |entrez_id=54518 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=INAG1 | + | |gene_alias=INAG1{{!}}PREL1{{!}}RARP1{{!}}RIAM |
|gene_description=amyloid beta precursor protein binding family B member 1 interacting protein | |gene_description=amyloid beta precursor protein binding family B member 1 interacting protein | ||
| − | |gene_name=APBB1IP | + | |gene_id=54518 |
| + | |gene_name=amyloid beta precursor protein binding family B member 1 interacting protein | ||
| + | |gene_source=HGNC:17379 | ||
| + | |gene_symbol=APBB1IP | ||
| + | |gene_synonyms=INAG1 RIAM | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17379 | ||
|nearest_ensembl=ENSG00000077420 | |nearest_ensembl=ENSG00000077420 | ||
|nearest_promoter_id=NM_019043 | |nearest_promoter_id=NM_019043 | ||
|nearest_refseq=NM_019043 | |nearest_refseq=NM_019043 | ||
|nearest_unigene=Hs.310421 | |nearest_unigene=Hs.310421 | ||
| + | |num_trans=54518 | ||
| + | |species=human | ||
| + | |start=26438317 | ||
| + | |start_of_center_position=26438355 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000376236.9 AK308916 AK000812 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104408.1 | |tss_id=hg_104408.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q7Z5R6 Q9NWJ6 | ||
}} | }} | ||
Latest revision as of 19:09, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26438355 |
|---|---|
| End of the center position in the TSS region: | 26438356 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376236.9 AK308916 AK000812 |
|---|---|
| Distance: | 0 |
| Num_trans: | 54518 |
| All_trans: | HGNC:17379 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_019043 |
| Entrez ID: | 54518 |
| Nearest Unigene: | Hs.310421 |
| Nearest Refseq: | NM_019043 |
| Nearest Ensembl: | ENSG00000077420 |
| Gene Name: | amyloid beta precursor protein binding family B member 1 interacting protein |
| Gene Alias: | INAG1|PREL1|RARP1|RIAM |
| Gene Description: | amyloid beta precursor protein binding family B member 1 interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
