Difference between revisions of "TSS:Hg 104443.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|PAMP= | |PAMP= | ||
|YME1L= | |YME1L= | ||
| − | |all_trans= | + | |all_trans=HGNC:19042 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 9: | Line 9: | ||
|distance_to_tss=-61 | |distance_to_tss=-61 | ||
|end=27154500 | |end=27154500 | ||
| + | |end_of_center_position=27154481 | ||
|entrez_id=10730 | |entrez_id=10730 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=FTSH | + | |gene_alias=FTSH{{!}}MEG4{{!}}OPA11{{!}}PAMP{{!}}YME1L |
|gene_description=YME1 like 1 ATPase | |gene_description=YME1 like 1 ATPase | ||
|gene_id=84930 | |gene_id=84930 | ||
| Line 21: | Line 22: | ||
|hgnc_mgi_id=HGNC:19042 | |hgnc_mgi_id=HGNC:19042 | ||
|nearest_ensembl=ENSG00000136758 | |nearest_ensembl=ENSG00000136758 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001253866 |
|nearest_refseq=NM_014263 | |nearest_refseq=NM_014263 | ||
|nearest_unigene=Hs.74647 | |nearest_unigene=Hs.74647 | ||
| − | |num_trans= | + | |num_trans=84930 |
|species=human | |species=human | ||
|start=27154461 | |start=27154461 | ||
| + | |start_of_center_position=27154480 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=45(TTTTTTAAGGGG,+,0.00) |
| − | |transcript_name=ENST00000375946.8 | + | |transcript_name=ENST00000375946.8 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104443.1 | |tss_id=hg_104443.1 | ||
Latest revision as of 19:10, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27154480 |
|---|---|
| End of the center position in the TSS region: | 27154481 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375946.8 |
|---|---|
| Distance: | 324 |
| Num_trans: | 84930 |
| All_trans: | HGNC:19042 |
TATA-Box annotation
| Distance to TSS: | -61 |
|---|---|
| Nearest PromoterID: | NM_001253866 |
| Entrez ID: | 10730 |
| Nearest Unigene: | Hs.74647 |
| Nearest Refseq: | NM_014263 |
| Nearest Ensembl: | ENSG00000136758 |
| Gene Name: | microtubule associated serine/threonine kinase like |
| Gene Alias: | FTSH|MEG4|OPA11|PAMP|YME1L |
| Gene Description: | YME1 like 1 ATPase |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 45(TTTTTTAAGGGG,+,0.00) |
