Difference between revisions of "TSS:Hg 104485.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|PRO1741= | |PRO1741= | ||
|Wwp4= | |Wwp4= | ||
| − | |all_trans= | + | |all_trans=HGNC:17327 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-13 |
|end=28532786 | |end=28532786 | ||
| + | |end_of_center_position=28532766 | ||
|entrez_id=51322 | |entrez_id=51322 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| − | |gene_alias=BM-016 | + | |gene_alias=BM-016{{!}}DESSH{{!}}PRO1741{{!}}Wwp4 |
|gene_description=WW domain containing adaptor with coiled-coil | |gene_description=WW domain containing adaptor with coiled-coil | ||
|gene_id=51322 | |gene_id=51322 | ||
| Line 24: | Line 25: | ||
|nearest_refseq=NM_016628 | |nearest_refseq=NM_016628 | ||
|nearest_unigene=Hs.743224 | |nearest_unigene=Hs.743224 | ||
| − | |num_trans= | + | |num_trans=51322 |
|species=human | |species=human | ||
|start=28532745 | |start=28532745 | ||
| + | |start_of_center_position=28532765 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000526722.1 ENST00000528491.5 | + | |transcript_name=ENST00000651598.1 ENST00000628285.3 ENST00000526722.1 ENST00000528491.5 ENST00000681112.1 ENST00000679570.1 ENST00000375646.5 AK055852 AK225846 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104485.1 | |tss_id=hg_104485.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A0A0MRT2 E9PMZ7 | + | |uniprot_id=A0A0A0MRT2 A0A494C0C1 E9PMZ7 Q9BTA9 Q9P1G8 |
}} | }} | ||
Latest revision as of 19:11, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 28532765 |
|---|---|
| End of the center position in the TSS region: | 28532766 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000651598.1 ENST00000628285.3 ENST00000526722.1 ENST00000528491.5 ENST00000681112.1 ENST00000679570.1 ENST00000375646.5 AK055852 AK225846 |
|---|---|
| Distance: | 0 |
| Num_trans: | 51322 |
| All_trans: | HGNC:17327 |
TATA-Box annotation
| Distance to TSS: | -13 |
|---|---|
| Nearest PromoterID: | NM_100264 |
| Entrez ID: | 51322 |
| Nearest Unigene: | Hs.743224 |
| Nearest Refseq: | NM_016628 |
| Nearest Ensembl: | ENSG00000095787 |
| Gene Name: | WW domain containing adaptor with coiled-coil |
| Gene Alias: | BM-016|DESSH|PRO1741|Wwp4 |
| Gene Description: | WW domain containing adaptor with coiled-coil |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
