Difference between revisions of "TSS:Hg 10456.1"
From referenceTSS
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| Line 4: | Line 4: | ||
|MCH6= | |MCH6= | ||
|PPP1R56= | |PPP1R56= | ||
| − | |all_trans= | + | |all_trans=HGNC:1511 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=-30 | |distance=-30 | ||
| − | |distance_to_tss= | + | |distance_to_tss=56 |
|end=15524162 | |end=15524162 | ||
| + | |end_of_center_position=15524159 | ||
|entrez_id=842 | |entrez_id=842 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=APAF-3 | + | |gene_alias=APAF-3{{!}}APAF3{{!}}ICE-LAP6{{!}}MCH6{{!}}PPP1R56 |
|gene_description=caspase 9 | |gene_description=caspase 9 | ||
|gene_id=842 | |gene_id=842 | ||
| Line 22: | Line 23: | ||
|hgnc_mgi_id=HGNC:1511 | |hgnc_mgi_id=HGNC:1511 | ||
|nearest_ensembl=ENSG00000132906 | |nearest_ensembl=ENSG00000132906 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001229 |
|nearest_refseq=NM_001229 | |nearest_refseq=NM_001229 | ||
|nearest_unigene=Hs.329502 | |nearest_unigene=Hs.329502 | ||
| − | |num_trans= | + | |num_trans=842 |
|species=human | |species=human | ||
|start=15524155 | |start=15524155 | ||
| + | |start_of_center_position=15524158 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000400777.7 | + | |transcript_name=ENST00000400777.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10456.1 | |tss_id=hg_10456.1 | ||
Latest revision as of 19:12, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 15524158 |
|---|---|
| End of the center position in the TSS region: | 15524159 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000400777.7 |
|---|---|
| Distance: | -30 |
| Num_trans: | 842 |
| All_trans: | HGNC:1511 |
TATA-Box annotation
| Distance to TSS: | 56 |
|---|---|
| Nearest PromoterID: | NM_001229 |
| Entrez ID: | 842 |
| Nearest Unigene: | Hs.329502 |
| Nearest Refseq: | NM_001229 |
| Nearest Ensembl: | ENSG00000132906 |
| Gene Name: | caspase 9 |
| Gene Alias: | APAF-3|APAF3|ICE-LAP6|MCH6|PPP1R56 |
| Gene Description: | caspase 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
