Difference between revisions of "TSS:Hg 10460.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:1511 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=-50 | ||
|distance_to_tss=-334 | |distance_to_tss=-334 | ||
| + | |end=15526484 | ||
| + | |end_of_center_position=15526479 | ||
|entrez_id=23341 | |entrez_id=23341 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=DnaJ heat shock protein family (Hsp40) member C16 | |gene_description=DnaJ heat shock protein family (Hsp40) member C16 | ||
| − | |gene_name= | + | |gene_id=842 |
| + | |gene_name=caspase 9 | ||
| + | |gene_source=HGNC:1511 | ||
| + | |gene_symbol=CASP9 | ||
| + | |gene_synonyms=APAF-3 ICE-LAP6 MCH6 PPP1R56 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1511 | ||
|nearest_ensembl=ENSG00000116138 | |nearest_ensembl=ENSG00000116138 | ||
|nearest_promoter_id=NM_001287811 | |nearest_promoter_id=NM_001287811 | ||
|nearest_refseq=NM_015291 | |nearest_refseq=NM_015291 | ||
|nearest_unigene=Hs.655410 | |nearest_unigene=Hs.655410 | ||
| + | |num_trans=842 | ||
| + | |species=human | ||
| + | |start=15526473 | ||
| + | |start_of_center_position=15526478 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000469637.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10460.1 | |tss_id=hg_10460.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A087WX72 | ||
}} | }} | ||
Latest revision as of 19:13, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 15526478 |
|---|---|
| End of the center position in the TSS region: | 15526479 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000469637.1 |
|---|---|
| Distance: | -50 |
| Num_trans: | 842 |
| All_trans: | HGNC:1511 |
TATA-Box annotation
| Distance to TSS: | -334 |
|---|---|
| Nearest PromoterID: | NM_001287811 |
| Entrez ID: | 23341 |
| Nearest Unigene: | Hs.655410 |
| Nearest Refseq: | NM_015291 |
| Nearest Ensembl: | ENSG00000116138 |
| Gene Name: | caspase 9 |
| Gene Alias: | - |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member C16 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
