Difference between revisions of "TSS:Hg 104601.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-79 |entrez_id=6935 |gc_percent=0.587065 |gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A |gene_description=z...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |BZP= | ||
| + | |DELTAEF1= | ||
| + | |FECD6= | ||
| + | |NIL2A= | ||
| + | |PPCD3= | ||
| + | |TCF8= | ||
| + | |ZFHEP= | ||
| + | |ZFHX1A= | ||
| + | |all_trans=NM_001323638:0 NM_001323643:0 ENST00000488625.6:70 BX647794:70 ENST00000560196.5:358 AK309331:358 ENST00000542879.5:393 NM_001323641:393 NM_001323644:393 NM_001323646:393 NM_001323645:393 NM_001323642:393 AK294775:393 ENST00000561304.5:412 AK311372:412 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance_to_tss=- | + | |distance=0 |
| + | |distance_to_tss=-1 | ||
| + | |end=31318425 | ||
| + | |end_of_center_position=31318416 | ||
|entrez_id=6935 | |entrez_id=6935 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=AREB6 | + | |gene_alias=AREB6{{!}}BZP{{!}}DELTAEF1{{!}}FECD6{{!}}NIL2A{{!}}PPCD3{{!}}TCF8{{!}}ZFHEP{{!}}ZFHX1A |
|gene_description=zinc finger E-box binding homeobox 1 | |gene_description=zinc finger E-box binding homeobox 1 | ||
| − | |gene_name=ZEB1 | + | |gene_id=6935 |
| + | |gene_name=zinc finger E-box binding homeobox 1 | ||
| + | |gene_source=HGNC:11642 | ||
| + | |gene_symbol=ZEB1 | ||
| + | |gene_synonyms=AREB6 BZP FECD6 NIL-2-A ZEB Zfhep Zfhx1a | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11642 | ||
|nearest_ensembl=ENSG00000148516 | |nearest_ensembl=ENSG00000148516 | ||
|nearest_promoter_id=NM_001323643 | |nearest_promoter_id=NM_001323643 | ||
|nearest_refseq=NM_030751 | |nearest_refseq=NM_030751 | ||
|nearest_unigene=Hs.124503 | |nearest_unigene=Hs.124503 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=31318406 | ||
| + | |start_of_center_position=31318415 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_001323638.2 NM_001323643.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104601.1 | |tss_id=hg_104601.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:13, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 31318415 |
|---|---|
| End of the center position in the TSS region: | 31318416 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001323638.2 NM_001323643.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | NM_001323638:0 NM_001323643:0 ENST00000488625.6:70 BX647794:70 ENST00000560196.5:358 AK309331:358 ENST00000542879.5:393 NM_001323641:393 NM_001323644:393 NM_001323646:393 NM_001323645:393 NM_001323642:393 AK294775:393 ENST00000561304.5:412 AK311372:412 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001323643 |
| Entrez ID: | 6935 |
| Nearest Unigene: | Hs.124503 |
| Nearest Refseq: | NM_030751 |
| Nearest Ensembl: | ENSG00000148516 |
| Gene Name: | zinc finger E-box binding homeobox 1 |
| Gene Alias: | AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A |
| Gene Description: | zinc finger E-box binding homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
