Difference between revisions of "TSS:Hg 10462.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:18407 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=1 | ||
| + | |end=15585084 | ||
| + | |end_of_center_position=15585050 | ||
|entrez_id=79814 | |entrez_id=79814 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=agmatinase | |gene_description=agmatinase | ||
| − | |gene_name=AGMAT | + | |gene_id=79814 |
| + | |gene_name=agmatinase | ||
| + | |gene_source=HGNC:18407 | ||
| + | |gene_symbol=AGMAT | ||
| + | |gene_synonyms=FLJ23384 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18407 | ||
|nearest_ensembl=ENSG00000116771 | |nearest_ensembl=ENSG00000116771 | ||
|nearest_promoter_id=NM_024758 | |nearest_promoter_id=NM_024758 | ||
|nearest_refseq=NM_024758 | |nearest_refseq=NM_024758 | ||
|nearest_unigene=Hs.461532 | |nearest_unigene=Hs.461532 | ||
| + | |num_trans=79814 | ||
| + | |species=human | ||
| + | |start=15585015 | ||
| + | |start_of_center_position=15585049 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375826.4 AK130034 AK225366 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10462.1 | |tss_id=hg_10462.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024QZ74 Q9BSE5 | ||
}} | }} | ||
Latest revision as of 19:13, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 15585049 |
|---|---|
| End of the center position in the TSS region: | 15585050 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000375826.4 AK130034 AK225366 |
|---|---|
| Distance: | 0 |
| Num_trans: | 79814 |
| All_trans: | HGNC:18407 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_024758 |
| Entrez ID: | 79814 |
| Nearest Unigene: | Hs.461532 |
| Nearest Refseq: | NM_024758 |
| Nearest Ensembl: | ENSG00000116771 |
| Gene Name: | agmatinase |
| Gene Alias: | - |
| Gene Description: | agmatinase |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
