Difference between revisions of "TSS:Hg 104627.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |BioT2-A= | ||
| + | |BioT2-B= | ||
| + | |BioT2-C= | ||
| + | |C10orf68= | ||
| + | |all_trans=HGNC:26533 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=2 | ||
| + | |end=32446182 | ||
| + | |end_of_center_position=32446143 | ||
|entrez_id=79741 | |entrez_id=79741 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=BIOT2 | + | |gene_alias=BIOT2{{!}}BioT2-A{{!}}BioT2-B{{!}}BioT2-C{{!}}C10orf68 |
|gene_description=coiled-coil domain containing 7 | |gene_description=coiled-coil domain containing 7 | ||
| − | |gene_name=CCDC7 | + | |gene_id=79741 |
| + | |gene_name=coiled-coil domain containing 7 | ||
| + | |gene_source=HGNC:26533 | ||
| + | |gene_symbol=CCDC7 | ||
| + | |gene_synonyms=BIOT2 FLJ13031 FLJ32762 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:26533 |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000216937 |
| + | |nearest_promoter_id=NM_001321115 | ||
|nearest_refseq=NM_024688 | |nearest_refseq=NM_024688 | ||
|nearest_unigene=Hs.585464 | |nearest_unigene=Hs.585464 | ||
| + | |num_trans=79741 | ||
| + | |species=human | ||
| + | |start=32446102 | ||
| + | |start_of_center_position=32446142 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000476558.7 ENST00000277657.12 ENST00000362006.11 AK057324 BC042672 BC022020 GQ891461 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104627.1 | |tss_id=hg_104627.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A384NKY2 Q96M83 | ||
}} | }} | ||
Latest revision as of 19:14, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 32446142 |
|---|---|
| End of the center position in the TSS region: | 32446143 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000476558.7 ENST00000277657.12 ENST00000362006.11 AK057324 BC042672 BC022020 GQ891461 |
|---|---|
| Distance: | 0 |
| Num_trans: | 79741 |
| All_trans: | HGNC:26533 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001321115 |
| Entrez ID: | 79741 |
| Nearest Unigene: | Hs.585464 |
| Nearest Refseq: | NM_024688 |
| Nearest Ensembl: | ENSG00000216937 |
| Gene Name: | coiled-coil domain containing 7 |
| Gene Alias: | BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 |
| Gene Description: | coiled-coil domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
