Personal tools

Difference between revisions of "TSS:Hg 104665.1"

From referenceTSS

Jump to: navigation, search
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|ICER=
 
|ICER=
−
|all_trans=ENST00000496626.5:0 NM_001267563:0 NM_001267562:0 NM_001881:0 NM_183013:0 NR_051975:0 NR_051974:0 NR_051973:0 uc057sse.1:0 ENST00000482646.5:1 uc057ssf.1:1 ENST00000374721.7:-24 uc057ssd.1:-24 ENST00000489388.5:34 uc057ssg.1:34 ENST00000474362.5:-43 uc001ixy.4:-43 ENST00000374726.7:51 uc001ixx.4:51 BC066342:51 ENST00000461968.5:76 uc057ssh.1:76 ENST00000490460.5:87 uc057ssi.1:87 BC017117:105 ENST00000466251.5:117 uc057ssj.1:117 ENST00000482633.5:176 uc057ssk.1:176 ENST00000495960.5:191 uc057ssl.1:191 ENST00000429130.7:219 uc057ssm.1:219 ENST00000469949.6:230 uc057ssn.1:230 ENST00000460270.5:245 uc001ixz.4:245 ENST00000496019.5:284 uc057sso.1:284 ENST00000354759.7:290 uc001iya.4:290 D14825:290
+
|all_trans=HGNC:2352
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 7: Line 7:
 
|distance_to_tss=12
 
|distance_to_tss=12
 
|end=35126872
 
|end=35126872
 +
|end_of_center_position=35126853
 
|entrez_id=1390
 
|entrez_id=1390
 
|gc_percent=0.696517
 
|gc_percent=0.696517
−
|gene_alias=CREM-2|ICER|hCREM-2
+
|gene_alias=CREM-2{{!}}ICER{{!}}hCREM-2
 
|gene_description=cAMP responsive element modulator
 
|gene_description=cAMP responsive element modulator
 
|gene_id=1390
 
|gene_id=1390
Line 20: Line 21:
 
|hgnc_mgi_id=HGNC:2352
 
|hgnc_mgi_id=HGNC:2352
 
|nearest_ensembl=ENSG00000095794
 
|nearest_ensembl=ENSG00000095794
−
|nearest_promoter_id=NR_051975
+
|nearest_promoter_id=NM_001881
 
|nearest_refseq=NM_001881
 
|nearest_refseq=NM_001881
 
|nearest_unigene=Hs.200250
 
|nearest_unigene=Hs.200250
−
|num_trans=42
+
|num_trans=1390
 
|species=human
 
|species=human
 
|start=35126833
 
|start=35126833
 +
|start_of_center_position=35126852
 
|strand=+
 
|strand=+
−
|transcript_name=ENST00000496626.5 NM_001267563 NM_001267562 NM_001881 NM_183013 NR_051975 NR_051974 NR_051973 uc057sse.1
+
|transcript_name=ENST00000496626.5
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_104665.1
 
|tss_id=hg_104665.1

Latest revision as of 19:14, 19 July 2021

Basic information about the TSS

TSS ID:hg_104665.1
Species:human
Chr:chr10
TSS Classification:yes
Start:35126833
End:35126872
Strand:+
TSS Score:1
Start of the center position in the TSS region:35126852
End of the center position in the TSS region:35126853



Gene and protein annotation

Transcript_name:ENST00000496626.5
Distance:0
GeneID:1390
HGNC/MGI_ID:HGNC:2352
UniProt_ID:Q03060
Gene_name:cAMP responsive element modulator
Gene_symbol:CREM
Gene_synonyms:hCREM-2
Gene_source:HGNC:2352



Transcript annotation

Transcript_name:ENST00000496626.5
Distance:0
Num_trans:1390
All_trans:HGNC:2352



TATA-Box annotation

Distance to TSS:12
Nearest PromoterID:NM_001881
Entrez ID:1390
Nearest Unigene:Hs.200250
Nearest Refseq:NM_001881
Nearest Ensembl:ENSG00000095794
Gene Name:cAMP responsive element modulator
Gene Alias:CREM-2|ICER|hCREM-2
Gene Description:cAMP responsive element modulator
Gene Type:protein-coding
CpG%:0.08
GC%:0.696517
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
Retrieved from "http://reftss.riken.jp/reftss-v3/index.php?title=TSS:Hg_104665.1&oldid=1503511"