Difference between revisions of "TSS:Hg 104671.1"
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{{TSSDetail | {{TSSDetail | ||
|ICER= | |ICER= | ||
| − | |all_trans=ENST00000354759.7 | + | |all_trans=NM_181571:-18 ENST00000354759.7:-83 D14825:-83 ENST00000496019.5:-89 ENST00000460270.5:-128 ENST00000469949.6:-143 ENST00000429130.7:-154 ENST00000489321.5:168 ENST00000495960.5:-182 ENST00000482633.5:-197 ENST00000427847.6:201 ENST00000374728.7:201 NM_183060:201 ENST00000345491.7:204 BC041810:204 ENST00000487132.5:221 NM_001267563:-244 NM_001267562:-244 NM_001352467:-244 NM_001352466:-244 NM_001352465:-244 NM_183013:-244 ENST00000466251.5:-256 BC017117:-268 ENST00000490460.5:-286 ENST00000461968.5:-297 ENST00000374726.7:-322 BC066342:-322 ENST00000489388.5:-339 ENST00000482646.5:-372 ENST00000496626.5:-404 NM_001881:-404 ENST00000374721.7:-435 ENST00000474362.5:-454 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| − | |distance=- | + | |distance=-18 |
| − | |distance_to_tss= | + | |distance_to_tss=23 |
|end=35127256 | |end=35127256 | ||
| + | |end_of_center_position=35127251 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=CREM-2 | + | |gene_alias=CREM-2{{!}}ICER{{!}}hCREM-2 |
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
|gene_id=1390 | |gene_id=1390 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:2352 | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_181571 |
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| − | |num_trans= | + | |num_trans=34 |
|species=human | |species=human | ||
|start=35127244 | |start=35127244 | ||
| + | |start_of_center_position=35127250 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_183060.3 NM_181571.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104671.1 | |tss_id=hg_104671.1 | ||
Latest revision as of 19:15, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35127250 |
|---|---|
| End of the center position in the TSS region: | 35127251 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_183060.3 NM_181571.3 |
|---|---|
| Distance: | -18 |
| Num_trans: | 34 |
| All_trans: | NM_181571:-18 ENST00000354759.7:-83 D14825:-83 ENST00000496019.5:-89 ENST00000460270.5:-128 ENST00000469949.6:-143 ENST00000429130.7:-154 ENST00000489321.5:168 ENST00000495960.5:-182 ENST00000482633.5:-197 ENST00000427847.6:201 ENST00000374728.7:201 NM_183060:201 ENST00000345491.7:204 BC041810:204 ENST00000487132.5:221 NM_001267563:-244 NM_001267562:-244 NM_001352467:-244 NM_001352466:-244 NM_001352465:-244 NM_183013:-244 ENST00000466251.5:-256 BC017117:-268 ENST00000490460.5:-286 ENST00000461968.5:-297 ENST00000374726.7:-322 BC066342:-322 ENST00000489388.5:-339 ENST00000482646.5:-372 ENST00000496626.5:-404 NM_001881:-404 ENST00000374721.7:-435 ENST00000474362.5:-454 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_181571 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2|ICER|hCREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
