Difference between revisions of "TSS:Hg 104742.1"
From referenceTSS
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|RET-ELE1= | |RET-ELE1= | ||
|RET51= | |RET51= | ||
| − | |all_trans= | + | |all_trans=HGNC:9967 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| Line 17: | Line 17: | ||
|entrez_id=5979 | |entrez_id=5979 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=CDHF12 | + | |gene_alias=CDHF12{{!}}CDHR16{{!}}HSCR1{{!}}MEN2A{{!}}MEN2B{{!}}MTC1{{!}}PTC{{!}}RET-ELE1 |
|gene_description=ret proto-oncogene | |gene_description=ret proto-oncogene | ||
|gene_id=5979 | |gene_id=5979 | ||
| Line 27: | Line 27: | ||
|hgnc_mgi_id=HGNC:9967 | |hgnc_mgi_id=HGNC:9967 | ||
|nearest_ensembl=ENSG00000165731 | |nearest_ensembl=ENSG00000165731 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_020975 |
|nearest_refseq=NM_000323 | |nearest_refseq=NM_000323 | ||
|nearest_unigene=Hs.350321 | |nearest_unigene=Hs.350321 | ||
| − | |num_trans= | + | |num_trans=5979 |
|species=human | |species=human | ||
|start=43077060 | |start=43077060 | ||
|start_of_center_position=43077067 | |start_of_center_position=43077067 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000615310.4 ENST00000498820.5 | + | |transcript_name=ENST00000671844.1 ENST00000672389.1 ENST00000340058.6 ENST00000615310.4 ENST00000355710.8 ENST00000498820.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104742.1 | |tss_id=hg_104742.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=C9JYL6 Q9BTX6 | + | |uniprot_id=A0A024R7T2 A0A5F9ZHB7 A0A5F9ZHR6 C9JYL6 P07949 Q9BTX6 |
}} | }} | ||
Latest revision as of 19:16, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 43077067 |
|---|---|
| End of the center position in the TSS region: | 43077068 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000671844.1 ENST00000672389.1 ENST00000340058.6 ENST00000615310.4 ENST00000355710.8 ENST00000498820.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5979 |
| All_trans: | HGNC:9967 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_020975 |
| Entrez ID: | 5979 |
| Nearest Unigene: | Hs.350321 |
| Nearest Refseq: | NM_000323 |
| Nearest Ensembl: | ENSG00000165731 |
| Gene Name: | ret proto-oncogene |
| Gene Alias: | CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 |
| Gene Description: | ret proto-oncogene |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
