Difference between revisions of "TSS:Hg 104762.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=62 |entrez_id=220992 |gc_percent=0.696517 |gene_alias=- |gene_description=zinc finger protein 485 |gene_name=ZNF485 |gene_type=...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:23440 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=31 | ||
| + | |end=43606484 | ||
| + | |end_of_center_position=43606470 | ||
|entrez_id=220992 | |entrez_id=220992 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=zinc finger protein 485 | |gene_description=zinc finger protein 485 | ||
| − | |gene_name=ZNF485 | + | |gene_id=220992 |
| + | |gene_name=zinc finger protein 485 | ||
| + | |gene_source=HGNC:23440 | ||
| + | |gene_symbol=ZNF485 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23440 | ||
|nearest_ensembl=ENSG00000198298 | |nearest_ensembl=ENSG00000198298 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_145312 |
|nearest_refseq=NM_145312 | |nearest_refseq=NM_145312 | ||
|nearest_unigene=Hs.147440 | |nearest_unigene=Hs.147440 | ||
| + | |num_trans=220992 | ||
| + | |species=human | ||
| + | |start=43606454 | ||
| + | |start_of_center_position=43606469 | ||
| + | |strand=+ | ||
| + | |transcript_name=BX648149 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104762.1 | |tss_id=hg_104762.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:17, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 43606469 |
|---|---|
| End of the center position in the TSS region: | 43606470 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BX648149 |
|---|---|
| Distance: | 0 |
| Num_trans: | 220992 |
| All_trans: | HGNC:23440 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_145312 |
| Entrez ID: | 220992 |
| Nearest Unigene: | Hs.147440 |
| Nearest Refseq: | NM_145312 |
| Nearest Ensembl: | ENSG00000198298 |
| Gene Name: | zinc finger protein 485 |
| Gene Alias: | - |
| Gene Description: | zinc finger protein 485 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
