Difference between revisions of "TSS:Hg 104781.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-556 |entrez_id=7570 |gc_percent=0.477612 |gene_alias=HKR-T1|KOX15|ZNF422|Zfp422 |gene_description=zinc finger protein 22 |gene_...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |KOX15= | ||
| + | |ZNF422= | ||
| + | |Zfp422= | ||
| + | |all_trans=HGNC:13012 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=197 |
| − | |entrez_id= | + | |distance_to_tss=641 |
| + | |end=45000277 | ||
| + | |end_of_center_position=45000270 | ||
| + | |entrez_id=220979 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | | | + | |gene_description=chromosome 10 open reading frame 25 |
| − | | | + | |gene_id=7570 |
| + | |gene_name=zinc finger protein 22 | ||
| + | |gene_source=HGNC:13012 | ||
| + | |gene_symbol=ZNF22 | ||
| + | |gene_synonyms=HKR-T1 KOX15 ZNF422 Zfp422 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:13012 |
| − | |nearest_promoter_id= | + | |nearest_ensembl= |
| − | |nearest_refseq= | + | |nearest_promoter_id=NR_126421 |
| − | |nearest_unigene=Hs. | + | |nearest_refseq=NM_001039380 |
| + | |nearest_unigene=Hs.707791 | ||
| + | |num_trans=7570 | ||
| + | |species=human | ||
| + | |start=45000261 | ||
| + | |start_of_center_position=45000269 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC041139 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104781.1 | |tss_id=hg_104781.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:17, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45000269 |
|---|---|
| End of the center position in the TSS region: | 45000270 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC041139 |
|---|---|
| Distance: | 197 |
| Num_trans: | 7570 |
| All_trans: | HGNC:13012 |
TATA-Box annotation
| Distance to TSS: | 641 |
|---|---|
| Nearest PromoterID: | NR_126421 |
| Entrez ID: | 220979 |
| Nearest Unigene: | Hs.707791 |
| Nearest Refseq: | NM_001039380 |
| Nearest Ensembl: | |
| Gene Name: | zinc finger protein 22 |
| Gene Alias: | - |
| Gene Description: | chromosome 10 open reading frame 25 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
