Difference between revisions of "TSS:Hg 104789.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|5LPG= | |5LPG= | ||
|LOG5= | |LOG5= | ||
| − | |all_trans= | + | |all_trans=HGNC:435 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=32 |
|end=45374260 | |end=45374260 | ||
| + | |end_of_center_position=45374248 | ||
|entrez_id=240 | |entrez_id=240 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=5-LO | + | |gene_alias=5-LO{{!}}5-LOX{{!}}5LPG{{!}}LOG5 |
|gene_description=arachidonate 5-lipoxygenase | |gene_description=arachidonate 5-lipoxygenase | ||
|gene_id=240 | |gene_id=240 | ||
| Line 21: | Line 22: | ||
|hgnc_mgi_id=HGNC:435 | |hgnc_mgi_id=HGNC:435 | ||
|nearest_ensembl=ENSG00000012779 | |nearest_ensembl=ENSG00000012779 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001320861 |
|nearest_refseq=NM_000698 | |nearest_refseq=NM_000698 | ||
|nearest_unigene=Hs.89499 | |nearest_unigene=Hs.89499 | ||
| − | |num_trans= | + | |num_trans=240 |
|species=human | |species=human | ||
|start=45374235 | |start=45374235 | ||
| + | |start_of_center_position=45374247 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC040450 J03600 J03571 | |transcript_name=BC040450 J03600 J03571 | ||
Latest revision as of 19:17, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 45374247 |
|---|---|
| End of the center position in the TSS region: | 45374248 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC040450 J03600 J03571 |
|---|---|
| Distance: | 0 |
| Num_trans: | 240 |
| All_trans: | HGNC:435 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_001320861 |
| Entrez ID: | 240 |
| Nearest Unigene: | Hs.89499 |
| Nearest Refseq: | NM_000698 |
| Nearest Ensembl: | ENSG00000012779 |
| Gene Name: | arachidonate 5-lipoxygenase |
| Gene Alias: | 5-LO|5-LOX|5LPG|LOG5 |
| Gene Description: | arachidonate 5-lipoxygenase |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
