Difference between revisions of "TSS:Hg 104835.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|BMP9= | |BMP9= | ||
|HHT5= | |HHT5= | ||
| − | |all_trans= | + | |all_trans=HGNC:4217 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=47322459 | |end=47322459 | ||
| + | |end_of_center_position=47322455 | ||
|entrez_id=2658 | |entrez_id=2658 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=BMP-9 | + | |gene_alias=BMP-9{{!}}BMP9{{!}}HHT5 |
|gene_description=growth differentiation factor 2 | |gene_description=growth differentiation factor 2 | ||
|gene_id=2658 | |gene_id=2658 | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_016204 | |nearest_refseq=NM_016204 | ||
|nearest_unigene=Hs.279463 | |nearest_unigene=Hs.279463 | ||
| − | |num_trans= | + | |num_trans=2658 |
|species=human | |species=human | ||
|start=47322450 | |start=47322450 | ||
| + | |start_of_center_position=47322454 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-35(GTTTATAGAGCC,+,0.00) |
| − | |transcript_name=ENST00000581492. | + | |transcript_name=ENST00000581492.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104835.1 | |tss_id=hg_104835.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9UK05 |
}} | }} | ||
Latest revision as of 19:18, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47322454 |
|---|---|
| End of the center position in the TSS region: | 47322455 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000581492.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2658 |
| All_trans: | HGNC:4217 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_016204 |
| Entrez ID: | 2658 |
| Nearest Unigene: | Hs.279463 |
| Nearest Refseq: | NM_016204 |
| Nearest Ensembl: | ENSG00000263761 |
| Gene Name: | growth differentiation factor 2 |
| Gene Alias: | BMP-9|BMP9|HHT5 |
| Gene Description: | growth differentiation factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GTTTATAGAGCC,+,0.00) |
