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Difference between revisions of "TSS:Hg 104892.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|VACHT=
 
|VACHT=
|all_trans=U09210:61 ENST00000374115.5:70 NM_003055:70 BC007765:135 AK313094:172 CU675799:498 JF432245:498 KJ897576:498
+
|all_trans=HGNC:10936
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 23: Line 23:
 
|nearest_refseq=NM_003055
 
|nearest_refseq=NM_003055
 
|nearest_unigene=Hs.654374
 
|nearest_unigene=Hs.654374
|num_trans=8
+
|num_trans=6572
 
|species=human
 
|species=human
 
|start=49610229
 
|start=49610229

Latest revision as of 19:19, 19 July 2021

Basic information about the TSS


TSS ID:hg_104892.1
Species:human
Chr:chr10
TSS Classification:yes
Start:49610229
End:49610240
Strand:+
TSS Score:1
Start of the center position in the TSS region:49610234
End of the center position in the TSS region:49610235



Gene and protein annotation


Transcript_name:U09210
Distance:61
GeneID:6572
HGNC/MGI_ID:HGNC:10936
UniProt_ID:
Gene_name:solute carrier family 18 member A3
Gene_symbol:SLC18A3
Gene_synonyms:VACHT
Gene_source:HGNC:10936



Transcript annotation


Transcript_name:U09210
Distance:61
Num_trans:6572
All_trans:HGNC:10936



TATA-Box annotation


Distance to TSS:-75
Nearest PromoterID:NM_003055
Entrez ID:6572
Nearest Unigene:Hs.654374
Nearest Refseq:NM_003055
Nearest Ensembl:ENSG00000187714
Gene Name:solute carrier family 18 member A3
Gene Alias:CMS21|VACHT
Gene Description:solute carrier family 18 member A3
Gene Type:protein-coding
CpG%:0.115
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):