Difference between revisions of "TSS:Hg 104893.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|VACHT= | |VACHT= | ||
| − | |all_trans= | + | |all_trans=HGNC:10936 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=49 | |distance=49 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-63 |
|end=49610252 | |end=49610252 | ||
|end_of_center_position=49610248 | |end_of_center_position=49610248 | ||
|entrez_id=6572 | |entrez_id=6572 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=CMS21 | + | |gene_alias=CMS21{{!}}VACHT |
|gene_description=solute carrier family 18 member A3 | |gene_description=solute carrier family 18 member A3 | ||
|gene_id=6572 | |gene_id=6572 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_003055 | |nearest_refseq=NM_003055 | ||
|nearest_unigene=Hs.654374 | |nearest_unigene=Hs.654374 | ||
| − | |num_trans= | + | |num_trans=6572 |
|species=human | |species=human | ||
|start=49610242 | |start=49610242 | ||
|start_of_center_position=49610247 | |start_of_center_position=49610247 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=U09210 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104893.1 | |tss_id=hg_104893.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 19:19, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 49610247 |
|---|---|
| End of the center position in the TSS region: | 49610248 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | U09210 |
|---|---|
| Distance: | 49 |
| Num_trans: | 6572 |
| All_trans: | HGNC:10936 |
TATA-Box annotation
| Distance to TSS: | -63 |
|---|---|
| Nearest PromoterID: | NM_003055 |
| Entrez ID: | 6572 |
| Nearest Unigene: | Hs.654374 |
| Nearest Refseq: | NM_003055 |
| Nearest Ensembl: | ENSG00000187714 |
| Gene Name: | solute carrier family 18 member A3 |
| Gene Alias: | CMS21|VACHT |
| Gene Description: | solute carrier family 18 member A3 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
