Difference between revisions of "TSS:Hg 105.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:37099 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-22 | |distance_to_tss=-22 | ||
|end=1426109 | |end=1426109 | ||
| + | |end_of_center_position=1426106 | ||
|entrez_id=643965 | |entrez_id=643965 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001146685 | |nearest_refseq=NM_001146685 | ||
|nearest_unigene=Hs.729765 | |nearest_unigene=Hs.729765 | ||
| − | |num_trans= | + | |num_trans=643965 |
|species=human | |species=human | ||
|start=1426102 | |start=1426102 | ||
| + | |start_of_center_position=1426105 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000378821.3 | + | |transcript_name=ENST00000378821.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105.1 | |tss_id=hg_105.1 | ||
Latest revision as of 19:21, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1426105 |
|---|---|
| End of the center position in the TSS region: | 1426106 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000378821.3 |
|---|---|
| Distance: | 19 |
| Num_trans: | 643965 |
| All_trans: | HGNC:37099 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NM_001146685 |
| Entrez ID: | 643965 |
| Nearest Unigene: | Hs.729765 |
| Nearest Refseq: | NM_001146685 |
| Nearest Ensembl: | ENSG00000205116 |
| Gene Name: | transmembrane protein 88B |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 88B |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
