Difference between revisions of "TSS:Hg 105019.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:45031 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=116 | |distance_to_tss=116 | ||
|end=58999649 | |end=58999649 | ||
| + | |end_of_center_position=58999634 | ||
|entrez_id=100507008 | |entrez_id=100507008 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 844 | |gene_description=long intergenic non-protein coding RNA 844 | ||
| − | |gene_id= | + | |gene_id= |
|gene_name=long intergenic non-protein coding RNA 844 | |gene_name=long intergenic non-protein coding RNA 844 | ||
|gene_source=HGNC:45031 | |gene_source=HGNC:45031 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_108046 | |nearest_refseq=NR_108046 | ||
|nearest_unigene=Hs.170953 | |nearest_unigene=Hs.170953 | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=58999618 | |start=58999618 | ||
| + | |start_of_center_position=58999633 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000432535.1 | + | |transcript_name=ENST00000661129.1 ENST00000432535.1 ENST00000654311.1 ENST00000660129.1 ENST00000657805.1 ENST00000653466.1 ENST00000669076.1 ENST00000661278.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105019.1 | |tss_id=hg_105019.1 | ||
Latest revision as of 19:22, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 58999633 |
|---|---|
| End of the center position in the TSS region: | 58999634 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000661129.1 ENST00000432535.1 ENST00000654311.1 ENST00000660129.1 ENST00000657805.1 ENST00000653466.1 ENST00000669076.1 ENST00000661278.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | |
| All_trans: | HGNC:45031 |
TATA-Box annotation
| Distance to TSS: | 116 |
|---|---|
| Nearest PromoterID: | NR_108046 |
| Entrez ID: | 100507008 |
| Nearest Unigene: | Hs.170953 |
| Nearest Refseq: | NR_108046 |
| Nearest Ensembl: | |
| Gene Name: | long intergenic non-protein coding RNA 844 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 844 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
