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Difference between revisions of "TSS:Hg 105023.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK054956:-27 AB384640:33 AM392743:33 BC011268:-62 ENST00000486074.2:-150 uc057tjx.1:-150 CR749429:-160 ENST00000373880.8:-221 uc001jkk.5:-221 NM_032439:-223 AL834339:-224 ENST00000373878.3:437 uc001jkm.5:437
+
|all_trans=HGNC:29378
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.06
 
|cpg_percent=0.06
 
|distance=-27
 
|distance=-27
|distance_to_tss=228
+
|distance_to_tss=173
 
|end=59176821
 
|end=59176821
 
|end_of_center_position=59176816
 
|end_of_center_position=59176816
Line 22: Line 22:
 
|nearest_refseq=NM_032439
 
|nearest_refseq=NM_032439
 
|nearest_unigene=Hs.499704
 
|nearest_unigene=Hs.499704
|num_trans=13
+
|num_trans=84457
 
|species=human
 
|species=human
 
|start=59176810
 
|start=59176810

Latest revision as of 19:22, 19 July 2021

Basic information about the TSS


TSS ID:hg_105023.1
Species:human
Chr:chr10
TSS Classification:yes
Start:59176810
End:59176821
Strand:+
TSS Score:1
Start of the center position in the TSS region:59176815
End of the center position in the TSS region:59176816



Gene and protein annotation


Transcript_name:AK054956
Distance:-27
GeneID:84457
HGNC/MGI_ID:HGNC:29378
UniProt_ID:
Gene_name:phytanoyl-CoA 2-hydroxylase interacting protein like
Gene_symbol:PHYHIPL
Gene_synonyms:Em:AC025038.1 KIAA1796
Gene_source:HGNC:29378



Transcript annotation


Transcript_name:AK054956
Distance:-27
Num_trans:84457
All_trans:HGNC:29378



TATA-Box annotation


Distance to TSS:173
Nearest PromoterID:NM_032439
Entrez ID:84457
Nearest Unigene:Hs.499704
Nearest Refseq:NM_032439
Nearest Ensembl:ENSG00000165443
Gene Name:phytanoyl-CoA 2-hydroxylase interacting protein like
Gene Alias:-
Gene Description:phytanoyl-CoA 2-hydroxylase interacting protein like
Gene Type:protein-coding
CpG%:0.06
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):