Difference between revisions of "TSS:Hg 105055.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:28678 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 9: | Line 9: | ||
|entrez_id=219621 | |entrez_id=219621 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias= | + | |gene_alias=C10orf107 |
| − | |gene_description= | + | |gene_description=ciliary associated calcium binding coiled-coil 1 |
|gene_id=219621 | |gene_id=219621 | ||
| − | |gene_name= | + | |gene_name=ciliary associated calcium binding coiled-coil 1 |
|gene_source=HGNC:28678 | |gene_source=HGNC:28678 | ||
| − | |gene_symbol= | + | |gene_symbol=CABCOCO1 |
|gene_synonyms=Em:AC022398.2 MGC44593 bA63A2.1 | |gene_synonyms=Em:AC022398.2 MGC44593 bA63A2.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_173554 | |nearest_refseq=NM_173554 | ||
|nearest_unigene=Hs.673160 | |nearest_unigene=Hs.673160 | ||
| − | |num_trans= | + | |num_trans=219621 |
|species=human | |species=human | ||
|start=61662937 | |start=61662937 | ||
|start_of_center_position=61662952 | |start_of_center_position=61662952 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000330194.2 | + | |transcript_name=ENST00000330194.2 BC041932 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105055.1 | |tss_id=hg_105055.1 | ||
Latest revision as of 19:23, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 61662952 |
|---|---|
| End of the center position in the TSS region: | 61662953 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000330194.2 BC041932 |
|---|---|
| Distance: | 0 |
| Num_trans: | 219621 |
| All_trans: | HGNC:28678 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NM_173554 |
| Entrez ID: | 219621 |
| Nearest Unigene: | Hs.673160 |
| Nearest Refseq: | NM_173554 |
| Nearest Ensembl: | ENSG00000183346 |
| Gene Name: | ciliary associated calcium binding coiled-coil 1 |
| Gene Alias: | C10orf107 |
| Gene Description: | ciliary associated calcium binding coiled-coil 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
